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Anti-Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

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Overview

Product name

Anti-Dnmt3a antibody [64B1446] - ChIP Grade
See all Dnmt3a products (10) ...

Description

Mouse monoclonal [64B1446] to Dnmt3a - ChIP Grade

Tested applications

WB, IHC-P, ChIP, Flow Cyt, IF, ICCmore details

Cross reactivity

Reacts with

Mouse, Human

Immunogen

Bacteria expressed HIS-tag recombinant mouse Dnmt3a.

Epitope

Found to lie near the C terminus (a.a. 705-908).

Positive control

293 cell lysate. Cultured HeLa cells. Dnmt3a Transfected and Untransfected Cell Lysate (ab90154) is the recommended positive control for WB.

Properties

Form

Liquid

Storage instructions

Shipped at 4°C. Upon delivery aliquot and store at -20°C or -80°C. Avoid repeated freeze / thaw cycles.

Storage buffer

Preservative: 0.05% Sodium Azide
Constituents: 0.05% BSA, PBS

Concentration

Concentration information loading...

Purity

Protein G purified

Clonality

Monoclonal

Clone number

64B1446

Isotype

IgG1

  • Western blot - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)Western blot - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888) image (enlarge)

  • Immunocytochemistry - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)Immunocytochemistry - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888) image (enlarge)

  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888) image (enlarge)

Applications

Show applications key

Our Abpromise guarantee covers the use of ab13888 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Target

Function

Required for genome wide de novo methylation and is essential for the establishment of DNA methylation patterns during development. DNA methylation is coordinated with methylation of histones. It modifies DNA in a non-processive manner and also methylates non-CpG sites. May preferentially methylate DNA linker between 2 nucleosomal cores and is inhibited by histone H1. Plays a role in paternal and maternal imprinting. Required for methylation of most imprinted loci in germ cells. Acts as a transcriptional corepressor for ZNF238. Can actively repress transcription through the recruitment of HDAC activity.

Tissue specificity

Highly expressed in fetal tissues, skeletal muscle, heart, peripheral blood mononuclear cells, kidney, and at lower levels in placenta, brain, liver, colon, spleen, small intestine and lung.

Sequence similarities

Belongs to the C5-methyltransferase family.
Contains 1 ADD domain.
Contains 1 GATA-type zinc finger.
Contains 1 PHD-type zinc finger.
Contains 1 PWWP domain.

Domain

The PWWP domain is essential for targeting to pericentric heterochromatin.

Post-translational
modifications

Sumoylated; sumoylation disrupts the ability to interact with histone deacetylases (HDAC1 and HDAC2) and repress transcription.

Cellular localization

Nucleus. Cytoplasm. Accumulates in the major satellite repeats at pericentric heterochromatin.

Target information above from: UniProt accessionQ9Y6K1 The UniProt Consortium
The Universal Protein Resource (UniProt) in 2010
Nucleic Acids Res. 38:D142-D148 (2010).

Information by UniProt

Alternative names

  • DNA (cytosine 5 ) methyltransferase 3 alpha antibody
  • DNA (cytosine 5) methyltransferase 3 alpha antibody
  • DNA (cytosine 5) methyltransferase 3A antibody
  • DNA (cytosine-5)-methyltransferase 3A antibody
  • DNA cytosine methyltransferase 3A2 antibody
  • DNA methyltransferase 3a antibody
  • DNA methyltransferase 3a antibody
  • DNA methyltransferase HsaIIIA antibody
  • DNA MTase HsaI antibody
  • DNA MTase HsaI antibody
  • DNA MTase HsaIIIA antibody
  • DNM3A_HUMAN antibody
  • DNMT 3a antibody
  • DNMT 3a antibody
  • DNMT antibody
  • DNMT antibody
  • Dnmt3a antibody
  • Dnmt3a antibody
  • DNMT3A2 antibody
  • M HsaIIIA antibody
  • M.HsaIIIA antibody
  • MCMT antibody
  • MCMT antibody
  • Methyl CpG binding domain protein 3a antibody
  • Methyl CpG binding domain protein 3a antibody
  • OTTHUMP00000201149 antibody
see all

Anti-Dnmt3a antibody [64B1446] - ChIP Grade images:

  Western blot - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

Western blot - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)



Predicted band size : 102 kDa


Western blot analysis for Dnmt3a using ab13888 at 2 ug/ml against 10 µg of 293 cell lysate transfected with either mouse Dnmt3a (lane A) or mouse Dnmt3b (lane B).

  Immunocytochemistry - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

Immunocytochemistry - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

Immuno-staining of Dnmt3a using ab13888 at 5 ug/ml dilution on cultured HeLa cells. The nucleic staining is shown in most of the cells.

  Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

ab13888 (2µg/ml) staining Dnmt3a in human testis using an automated system (DAKO Autostainer Plus). Using this protocol there is strong nuclear staining in the seminal vesicles.
Sections were rehydrated and antigen retrieved with the Dako 3 in 1 AR buffer citrate pH6.1 in a DAKO PT link. Slides were peroxidase blocked in 3% H2O2 in methanol for 10 mins. They were then blocked with Dako Protein block for 10 minutes (containing casein 0.25% in PBS) then incubated with primary antibody for 20 min and detected with Dako envision flex amplification kit for 30 minutes. Colorimetric detection was completed with Diaminobenzidine for 5 minutes. Slides were counterstained with Haematoxylin and coverslipped under DePeX. Please note that, for manual staining, optimization of primary antibody concentration and incubation time is recommended. Signal amplification may be required.

  Immunocytochemistry/ Immunofluorescence - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

Immunocytochemistry/ Immunofluorescence - Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

ICC/IF image of ab13888 stainedHepG2 cells. The cells were 4% PFA fixed (10 min) and then incubated in 1%BSA / 10% normal goat serum / 0.3M glycine in 0.1% PBS-Tween for 1h to permeabilise the cells and block non-specific protein-protein interactions. The cells were then incubated with the antibody (ab13888, 5µg/ml) overnight at +4°C. The secondary antibody (green) was DyLight® 488 goat anti-mouse IgG - H&L, pre-adsorbed (ab96879) used at a 1/250 dilution for 1h. Alexa Fluor® 594 WGA was used to label plasma membranes (red) at a 1/200 dilution for 1h. DAPI was used to stain the cell nuclei (blue) at a concentration of 1.43µM.

  Flow Cytometry-Anti-Dnmt3a antibody [64B1446] - ChIP Grade(ab13888)

Flow Cytometry-Anti-Dnmt3a antibody [64B1446] - ChIP Grade(ab13888)

Overlay histogram showing HEK293 cells stained with ab13888 (red line). The cells were fixed with 4% paraformaldehyde (10 min) and then permeabilized with 0.1% PBS-Tween for 20 min. The cells were then incubated in 1x PBS / 10% normal goat serum / 0.3M glycine to block non-specific protein-protein interactions. The cells were then incubated with the antibody (ab138889, 1µg/1x106 cells) for 30 min at 22ºC. The secondary antibody used was DyLight® 488 goat anti-mouse IgG (H+L) (ab96879) at 1/500 dilution for 30 min at 22ºC. Isotype control antibody (black line) was mouse IgG1 [ICIGG1] (ab91353, 2µg/1x106 cells ) used under the same conditions. Acquisition of >5,000 events was performed. This antibody gave a positive signal in HEK293 cells fixed with 80% methanol (5 min)/permeabilized in 0.1% PBS-Tween used under the same conditions.

References for Anti-Dnmt3a antibody [64B1446] - ChIP Grade (ab13888)

This product has been referenced in:

  • Challen GA  et al. Dnmt3a is essential for hematopoietic stem cell differentiation. Nat Genet 44:23-31 (2012). ChIP; Mouse.Read more (PubMed: 22138693) »
  • Kotini AG  et al. Dnmt3a1 upregulates transcription of distinct genes and targets chromosomal gene clusters for epigenetic silencing in mouse embryonic stem cells. Mol Cell Biol 31:1577-92 (2011). Mouse.Read more (PubMed: 21262766) »

See all 9 publications for this product

Publishing research using ab13888? Please let us know so that we can cite the reference in this datasheet

Please note: All products are "FOR RESEARCH USE ONLY AND ARE NOT INTENDED FOR DIAGNOSTIC OR THERAPEUTIC USE"