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Anti-Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

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Overview

Product name

Anti-Histone H3 (di methyl K27) antibody - ChIP Grade
See all Histone H3 products (41) ...

Description

Rabbit polyclonal to Histone H3 (di methyl K27) - ChIP Grade

Specificity

This antibody is specific for Histone H3 di-methylated at residue K27. It does not recognise the mono- or tri-methylated K27 residue or the mono-/di-/tri-methylated H3 K9 residue.

Tested applications

WB, IP, ICC/IF, ChIPmore details

Cross reactivity

Reacts with

Mouse, Cow, Human, Caenorhabditis elegans

Predicted to work with

Fruit fly (Drosophila melanogaster)

Immunogen

Synthetic peptide conjugated to KLH derived from within residues 1 - 100 of Human Histone H3, di methylated at K27.

(Peptide available as ab1781 .)

Positive control

Calf thymus histone lysate

Properties

Form

Liquid

Storage instructions

Store at +4°C short term (1-2 weeks). Aliquot and store at -20°C or -80°C. Avoid repeated freeze / thaw cycles.

Storage buffer

Preservative: 0.02% Sodium Azide
Constituents: 1% BSA, PBS, pH 7.4

Concentration

Concentration information loading...

Purity

Immunogen affinity purified

Clonality

Polyclonal

Isotype

IgG

  • Western blot - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)Western blot - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684) image (enlarge)

  • ChIP - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)ChIP - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684) image (enlarge)

  • Immunocytochemistry/ Immunofluorescence - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)Immunocytochemistry/ Immunofluorescence - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684) image (enlarge)

Applications

Show applications key

Our Abpromise guarantee covers the use of ab24684 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Target

Function

Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.

Sequence similarities

Belongs to the histone H3 family.

Developmental stage

Expressed during S phase, then expression strongly decreases as cell division slows down during the process of differentiation.

Post-translational
modifications

Acetylation is generally linked to gene activation. Acetylation on Lys-10 (H3K9ac) impairs methylation at Arg-9 (H3R8me2s). Acetylation on Lys-19 (H3K18ac) and Lys-24 (H3K24ac) favors methylation at Arg-18 (H3R17me).
Citrullination at Arg-9 (H3R8ci) and/or Arg-18 (H3R17ci) by PADI4 impairs methylation and represses transcription.
Asymmetric dimethylation at Arg-18 (H3R17me2a) by CARM1 is linked to gene activation. Symmetric dimethylation at Arg-9 (H3R8me2s) by PRMT5 is linked to gene repression. Asymmetric dimethylation at Arg-3 (H3R2me2a) by PRMT6 is linked to gene repression and is mutually exclusive with H3 Lys-5 methylation (H3K4me2 and H3K4me3). H3R2me2a is present at the 3' of genes regardless of their transcription state and is enriched on inactive promoters, while it is absent on active promoters.
Methylation at Lys-5 (H3K4me), Lys-37 (H3K36me) and Lys-80 (H3K79me) are linked to gene activation. Methylation at Lys-5 (H3K4me) facilitates subsequent acetylation of H3 and H4. Methylation at Lys-80 (H3K79me) is associated with DNA double-strand break (DSB) responses and is a specific target for TP53BP1. Methylation at Lys-10 (H3K9me) and Lys-28 (H3K27me) are linked to gene repression. Methylation at Lys-10 (H3K9me) is a specific target for HP1 proteins (CBX1, CBX3 and CBX5) and prevents subsequent phosphorylation at Ser-11 (H3S10ph) and acetylation of H3 and H4. Methylation at Lys-5 (H3K4me) and Lys-80 (H3K79me) require preliminary monoubiquitination of H2B at 'Lys-120'. Methylation at Lys-10 (H3K9me) and Lys-28 (H3K27me) are enriched in inactive X chromosome chromatin.
Phosphorylated at Thr-4 (H3T3ph) by GSG2/haspin during prophase and dephosphorylated during anaphase. Phosphorylation at Ser-11 (H3S10ph) by AURKB is crucial for chromosome condensation and cell-cycle progression during mitosis and meiosis. In addition phosphorylation at Ser-11 (H3S10ph) by RPS6KA4 and RPS6KA5 is important during interphase because it enables the transcription of genes following external stimulation, like mitogens, stress, growth factors or UV irradiation and result in the activation of genes, such as c-fos and c-jun. Phosphorylation at Ser-11 (H3S10ph), which is linked to gene activation, prevents methylation at Lys-10 (H3K9me) but facilitates acetylation of H3 and H4. Phosphorylation at Ser-11 (H3S10ph) by AURKB mediates the dissociation of HP1 proteins (CBX1, CBX3 and CBX5) from heterochromatin. Phosphorylation at Ser-11 (H3S10ph) is also an essential regulatory mechanism for neoplastic cell transformation. Phosphorylated at Ser-29 (H3S28ph) by MLTK isoform 1, RPS6KA5 or AURKB during mitosis or upon ultraviolet B irradiation. Phosphorylation at Thr-7 (H3T6ph) by PRKCBB is a specific tag for epigenetic transcriptional activation that prevents demethylation of Lys-5 (H3K4me) by LSD1/KDM1A. At centromeres, specifically phosphorylated at Thr-12 (H3T11ph) from prophase to early anaphase, by DAPK3 and PKN1. Phosphorylation at Thr-12 (H3T11ph) by PKN1 is a specific tag for epigenetic transcriptional activation that promotes demethylation of Lys-10 (H3K9me) by KDM4C/JMJD2C. Phosphorylation at Tyr-42 (H3Y41ph) by JAK2 promotes exclusion of CBX5 (HP1 alpha) from chromatin.
Monoubiquitinated by RAG1 in lymphoid cells, monoubiquitination is required for V(D)J recombination (By similarity). Ubiquitinated by the CUL4-DDB-RBX1 complex in response to ultraviolet irradiation. This may weaken the interaction between histones and DNA and facilitate DNA accessibility to repair proteins.

Cellular localization

Nucleus. Chromosome.

Target information above from: UniProt accessionP68431 The UniProt Consortium
The Universal Protein Resource (UniProt) in 2010
Nucleic Acids Res. 38:D142-D148 (2010).

Information by UniProt

Alternative names

  • Histone H3.1 antibody
  • FLJ92264 antibody
  • H3 histone antibody
  • H3 histone antibody
  • H3 histone family, member A antibody
  • H3/a antibody
  • H3/b antibody
  • H3/c antibody
  • H3/d antibody
  • h3/f antibody
  • H3/h antibody
  • H3/i antibody
  • H3/j antibody
  • H3/k antibody
  • H3/l antibody
  • H31_HUMAN antibody
  • H3F1K antibody
  • H3F3 antibody
  • H3FA antibody
  • H3FB antibody
  • H3FC antibody
  • H3FD antibody
  • H3FF antibody
  • H3FH antibody
  • H3FI antibody
  • H3FJ antibody
  • H3FK antibody
  • H3FL antibody
  • HIST1H3A antibody
  • HIST1H3B antibody
  • HIST1H3C antibody
  • HIST1H3D antibody
  • HIST1H3E antibody
  • HIST1H3F antibody
  • HIST1H3G antibody
  • HIST1H3H antibody
  • HIST1H3I antibody
  • HIST1H3J antibody
  • HIST3H3 antibody
  • Histone 1, H3a antibody
  • Histone cluster 1, H3a antibody
  • Histone cluster 1, H3b antibody
  • Histone cluster 1, H3c antibody
  • Histone cluster 1, H3d antibody
  • Histone cluster 1, H3e antibody
  • Histone cluster 1, H3f antibody
  • Histone cluster 1, H3g antibody
  • Histone cluster 1, H3i antibody
  • Histone cluster 1, H3j antibody
  • Histone H 3 antibody
  • Histone H3.1 antibody
  • Histone H3/a antibody
  • Histone H3/b antibody
  • Histone H3/c antibody
  • Histone H3/d antibody
  • Histone H3/f antibody
  • Histone H3/h antibody
  • Histone H3/i antibody
  • Histone H3/j antibody
  • Histone H3/k antibody
  • Histone H3/l antibody
see all

Anti-Histone H3 (di methyl K27) antibody - ChIP Grade images:

  Western blot - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

Western blot - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

All lanes : Anti-Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684) at 1 µg/ml

Lane 1 : Calf thymus histone lysate
Lane 2 : Calf thymus histone lysate with Histone H3 peptide (ab17163) at 0.5 µg/ml
Lane 3 : Calf thymus histone lysate with Histone H3 peptide - mono methyl K4 (ab1340) at 0.5 µg/ml
Lane 4 : Calf thymus histone lysate with Histone H3 peptide - di methyl K4 (ab7768) at 0.5 µg/ml
Lane 5 : Calf thymus histone lysate with Histone H3 peptide - tri methyl K4 (ab1342) at 0.5 µg/ml
Lane 6 : Calf thymus histone lysate with Histone H3 peptide - mono methyl K9 (ab1771) at 0.5 µg/ml
Lane 7 : Calf thymus histone lysate with Histone H3 peptide - di methyl K9 (ab1772) at 0.5 µg/ml
Lane 8 : Calf thymus histone lysate with Histone H3 peptide - tri methyl K9 (ab1773) at 0.5 µg/ml
Lane 9 : Calf thymus histone lysate with Histone H3 peptide - mono methyl K27 (ab1780) at 0.5 µg/ml
Lane 10 : Calf thymus histone lysate with Histone H3 peptide - di methyl K27 (ab1781) at 0.5 µg/ml
Lane 11 : Calf thymus histone lysate with Histone H3 peptide - tri methyl K27 (ab1782) at 0.5 µg/ml

Secondary
Goat polyclonal to Rabbit IgG H&L (HRP) at 1/5000 dilution

Predicted band size : 15.2 kDa
Observed band size : 17 kDa (why is the actual band size different from the predicted?)


Exposure time : 5 seconds

The peptide competition assay shows that this antibody is very specific for Histone H3 di-methylated at K27. It does not recognise Histone H3 mono, di, or tri methylated at K4, Histone H3 mono, di, or tri methylated at K9, or Histone H3 mono, or tri methylated at K27.

  ChIP - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

ChIP - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

Chromatin was prepared from Hela cells according to the Abcam X-ChIP protocol. Cells were fixed with formaldehyde for 10min. The  ChIP was performed with 25µg of chromatin, 2µg of  ab24684 (blue), and 20µl of Protein A/G sepharose beads. No antibody was added to the beads control (yellow). The immunoprecipitated DNA was quantified by real time PCR (Taqman approach for active and inactive loci, Sybr green approach for heterochromatic loci). Primers and probes are located in the first kb of the transcribed region.

  Immunocytochemistry/ Immunofluorescence - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

Immunocytochemistry/ Immunofluorescence - Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

ICC/IF image of ab24684 stained human HeLa cells. The cells were PFA fixed (10 min), permabilised in TBS-T (20 min) and incubated with the antibody (ab24684, 1µg/ml) for 1h at room temperature. 1%BSA / 10% normal goat serum / 0.3M glycine was used to quench autofluorescence and block non-specific protein-protein interactions. The secondary antibody (green) was Alexa Fluor® 488 goat anti-rabbit IgG (H+L) used at a 1/1000 dilution for 1h. Alexa Fluor® 594 WGA was used to label plasma membranes (red). DAPI was used to stain the cell nuclei (blue).

References for Anti-Histone H3 (di methyl K27) antibody - ChIP Grade (ab24684)

This product has been referenced in:

  • Mysliwiec MR  et al. Jarid2 (Jumonji, AT Rich Interactive Domain 2) Regulates NOTCH1 Expression via Histone Modification in the Developing Heart. J Biol Chem 287:1235-41 (2012). ChIP; Mouse.Read more (PubMed: 22110129) »
  • Huang C  et al. Dual-specificity histone demethylase KIAA1718 (KDM7A) regulates neural differentiation through FGF4. Cell Res 20:154-65 (2010). WB; Human.Read more (PubMed: 20084082) »

See all 11 publications for this product

Publishing research using ab24684? Please let us know so that we can cite the reference in this datasheet

Please note: All products are "FOR RESEARCH USE ONLY AND ARE NOT INTENDED FOR DIAGNOSTIC OR THERAPEUTIC USE"