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Anti-Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

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Overview

Product name

Anti-Histone H3 (tri methyl K36) antibody - ChIP Grade
See all Histone H3 products (41) ...

Description

Rabbit polyclonal to Histone H3 (tri methyl K36) - ChIP Grade

Specificity

Histone H3 tri methylated at lysine 36

Tested applications

ICC/IF, CHIPseq, WB, ChIP, ChIP/Chip, IHC-Pmore details

Cross reactivity

Reacts with

Mouse, Rat, Cow, Human, Saccharomyces cerevisiae, Xenopus laevis, Arabidopsis thaliana, Caenorhabditis elegans, Fruit fly (Drosophila melanogaster), Schizosaccharomyces pombe, Zebrafish, Trypanosoma brucei

Predicted to work with

Plants

Immunogen

Synthetic peptide conjugated to KLH derived from within residues 1 - 100 of Human Histone H3, tri methylated at K36.

(Peptide available as ab1785.)

Properties

Form

Liquid

Storage instructions

Shipped at 4°C. Upon delivery aliquot and store at -20°C or -80°C. Avoid repeated freeze / thaw cycles.

Storage buffer

Preservative: 0.02% Sodium Azide
Constituents: 1% BSA, PBS, pH 7.4

Concentration

Concentration information loading...

Purity

Immunogen affinity purified

Primary antibody notes

For detection of methylated histone H3

Clonality

Polyclonal

Isotype

IgG

  • ChIP - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)ChIP - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050) image (enlarge)

  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050) image (enlarge)

  • Immunocytochemistry/ Immunofluorescence - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)Immunocytochemistry/ Immunofluorescence - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050) image (enlarge)

Applications

Show applications key

Our Abpromise guarantee covers the use of ab9050 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Target

Function

Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.

Sequence similarities

Belongs to the histone H3 family.

Developmental stage

Expressed during S phase, then expression strongly decreases as cell division slows down during the process of differentiation.

Post-translational
modifications

Acetylation is generally linked to gene activation. Acetylation on Lys-10 (H3K9ac) impairs methylation at Arg-9 (H3R8me2s). Acetylation on Lys-19 (H3K18ac) and Lys-24 (H3K24ac) favors methylation at Arg-18 (H3R17me).
Citrullination at Arg-9 (H3R8ci) and/or Arg-18 (H3R17ci) by PADI4 impairs methylation and represses transcription.
Asymmetric dimethylation at Arg-18 (H3R17me2a) by CARM1 is linked to gene activation. Symmetric dimethylation at Arg-9 (H3R8me2s) by PRMT5 is linked to gene repression. Asymmetric dimethylation at Arg-3 (H3R2me2a) by PRMT6 is linked to gene repression and is mutually exclusive with H3 Lys-5 methylation (H3K4me2 and H3K4me3). H3R2me2a is present at the 3' of genes regardless of their transcription state and is enriched on inactive promoters, while it is absent on active promoters.
Methylation at Lys-5 (H3K4me), Lys-37 (H3K36me) and Lys-80 (H3K79me) are linked to gene activation. Methylation at Lys-5 (H3K4me) facilitates subsequent acetylation of H3 and H4. Methylation at Lys-80 (H3K79me) is associated with DNA double-strand break (DSB) responses and is a specific target for TP53BP1. Methylation at Lys-10 (H3K9me) and Lys-28 (H3K27me) are linked to gene repression. Methylation at Lys-10 (H3K9me) is a specific target for HP1 proteins (CBX1, CBX3 and CBX5) and prevents subsequent phosphorylation at Ser-11 (H3S10ph) and acetylation of H3 and H4. Methylation at Lys-5 (H3K4me) and Lys-80 (H3K79me) require preliminary monoubiquitination of H2B at 'Lys-120'. Methylation at Lys-10 (H3K9me) and Lys-28 (H3K27me) are enriched in inactive X chromosome chromatin.
Phosphorylated at Thr-4 (H3T3ph) by GSG2/haspin during prophase and dephosphorylated during anaphase. Phosphorylation at Ser-11 (H3S10ph) by AURKB is crucial for chromosome condensation and cell-cycle progression during mitosis and meiosis. In addition phosphorylation at Ser-11 (H3S10ph) by RPS6KA4 and RPS6KA5 is important during interphase because it enables the transcription of genes following external stimulation, like mitogens, stress, growth factors or UV irradiation and result in the activation of genes, such as c-fos and c-jun. Phosphorylation at Ser-11 (H3S10ph), which is linked to gene activation, prevents methylation at Lys-10 (H3K9me) but facilitates acetylation of H3 and H4. Phosphorylation at Ser-11 (H3S10ph) by AURKB mediates the dissociation of HP1 proteins (CBX1, CBX3 and CBX5) from heterochromatin. Phosphorylation at Ser-11 (H3S10ph) is also an essential regulatory mechanism for neoplastic cell transformation. Phosphorylated at Ser-29 (H3S28ph) by MLTK isoform 1, RPS6KA5 or AURKB during mitosis or upon ultraviolet B irradiation. Phosphorylation at Thr-7 (H3T6ph) by PRKCBB is a specific tag for epigenetic transcriptional activation that prevents demethylation of Lys-5 (H3K4me) by LSD1/KDM1A. At centromeres, specifically phosphorylated at Thr-12 (H3T11ph) from prophase to early anaphase, by DAPK3 and PKN1. Phosphorylation at Thr-12 (H3T11ph) by PKN1 is a specific tag for epigenetic transcriptional activation that promotes demethylation of Lys-10 (H3K9me) by KDM4C/JMJD2C. Phosphorylation at Tyr-42 (H3Y41ph) by JAK2 promotes exclusion of CBX5 (HP1 alpha) from chromatin.
Monoubiquitinated by RAG1 in lymphoid cells, monoubiquitination is required for V(D)J recombination (By similarity). Ubiquitinated by the CUL4-DDB-RBX1 complex in response to ultraviolet irradiation. This may weaken the interaction between histones and DNA and facilitate DNA accessibility to repair proteins.

Cellular localization

Nucleus. Chromosome.

Target information above from: UniProt accessionP68431 The UniProt Consortium
The Universal Protein Resource (UniProt) in 2010
Nucleic Acids Res. 38:D142-D148 (2010).

Information by UniProt

Alternative names

  • Histone H3.1 antibody
  • FLJ92264 antibody
  • H3 histone antibody
  • H3 histone antibody
  • H3 histone family, member A antibody
  • H3/a antibody
  • H3/b antibody
  • H3/c antibody
  • H3/d antibody
  • h3/f antibody
  • H3/h antibody
  • H3/i antibody
  • H3/j antibody
  • H3/k antibody
  • H3/l antibody
  • H31_HUMAN antibody
  • H3F1K antibody
  • H3F3 antibody
  • H3FA antibody
  • H3FB antibody
  • H3FC antibody
  • H3FD antibody
  • H3FF antibody
  • H3FH antibody
  • H3FI antibody
  • H3FJ antibody
  • H3FK antibody
  • H3FL antibody
  • HIST1H3A antibody
  • HIST1H3B antibody
  • HIST1H3C antibody
  • HIST1H3D antibody
  • HIST1H3E antibody
  • HIST1H3F antibody
  • HIST1H3G antibody
  • HIST1H3H antibody
  • HIST1H3I antibody
  • HIST1H3J antibody
  • HIST3H3 antibody
  • Histone 1, H3a antibody
  • Histone cluster 1, H3a antibody
  • Histone cluster 1, H3b antibody
  • Histone cluster 1, H3c antibody
  • Histone cluster 1, H3d antibody
  • Histone cluster 1, H3e antibody
  • Histone cluster 1, H3f antibody
  • Histone cluster 1, H3g antibody
  • Histone cluster 1, H3i antibody
  • Histone cluster 1, H3j antibody
  • Histone H 3 antibody
  • Histone H3.1 antibody
  • Histone H3/a antibody
  • Histone H3/b antibody
  • Histone H3/c antibody
  • Histone H3/d antibody
  • Histone H3/f antibody
  • Histone H3/h antibody
  • Histone H3/i antibody
  • Histone H3/j antibody
  • Histone H3/k antibody
  • Histone H3/l antibody
see all

Anti-Histone H3 (tri methyl K36) antibody - ChIP Grade images:

  ChIP - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

ChIP - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

Chromatin was prepared from U2OS cells according to the Abcam X-ChIP protocol. Cells were fixed with formaldehyde for 10min. The  ChIP was performed with 25µg of chromatin, 2µg of ab9050 (blue), and 20µl of Protein A/G sepharose beads. No antibody was added to the beads control (yellow). The immunoprecipitated DNA was quantified on the GAPDH (active) and MYO-D (inactive) promoters and over the ý-Actin gene (active). Schematic diagram of the ý-Actin gene is shown on the top of the figure. Black boxes represent exons and thin lines represent introns. PCR products are depicted as bars under the gene.

  Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

Staining of human tonsil using ab9050 is shown. Antigen retrieval was performed using Tris EDTA at pH9. Nuclei of lymphoid cells in the interfollicular area of a human tonsil stained strongly positive as well as the endothelial cells of blood vessels.

  Immunocytochemistry/ Immunofluorescence - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

Immunocytochemistry/ Immunofluorescence - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

ICC/IF image of ab9050 stained human HeLa cells. The cells were methanol fixed (5 min), permabilised in TBS-T (20 min) and incubated with the antibody (ab9050, 1µg/ml) for 1h at room temperature. 1%BSA / 10% normal goat serum / 0.3M glycine was used to quench autofluorescence and block non-specific protein-protein interactions. The secondary antibody (green) was Alexa Fluor® 488 goat anti-rabbit IgG (H+L) used at a 1/1000 dilution for 1h. Alexa Fluor® 594 WGA was used to label plasma membranes (red). DAPI was used to stain the cell nuclei (blue).

  Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

ab9050 staining rat liver tissue sections by IHC-P.  The section was formaldehyde fixed and subjected to heat mediated antigen retrieval in pH 6.0 citrate buffer prior to being blocked with 5% serum for 30 minutes at 45°C.  The primary antibody was diluted 1/500 and incubated for 45 minutes at 20°C.  A HRP conjugated goat anti-rabbit was used as the secondary

This image is courtesy of an anonymous Abreview

See Abreview

  Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

ab9050 staining mouse kidney tissue sections by IHC-P.  The section was formaldehyde fixed and subjected to heat mediated antigen retrieval in pH 6.0 citrate buffer prior to being blocked with 5% serum for 30 minutes at 20°C.  The primary antibody was diluted 1/500 and incubated for 45 minutes at 20°C.  A HRP conjugated goat anti-rabbit was used as the secondary

This image is courtesy of an anonymous Abreview

See Abreview

  ChIP - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

ChIP - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

ChIP using ab9050 at the Pho4 locus in S. pombe. Chromatin extract from S.pombe cells was incubated with 5 ug of ab9050 overnight, and then incubated with Protein A beads for 1 hour. The immunoprecipitated DNA was quantified at the Pho4 locus by RT-PCR. No antibody was added to the beads control (red bars). A schematic diagram of the pho4 gene is shown below the graph. The grey box represents the open reading frame and PCR products are depicted by horizontal arrows. Please see anonymous abreview submitted on 29 October 2008 for additional details.

This image is courtesy of an anonymous Abreview

See Abreview

  Western blot - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

Western blot - Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

All lanes : Anti-Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050) at 1 µg/ml

Lane 1 : Calf Thymus Histone Preparation Nuclear Lysate
Lane 2 : Calf Thymus Histone Preparation Nuclear Lysate with Histone H3 peptide - unmodified K36 at 0.5 µg/ml
Lane 3 : Calf Thymus Histone Preparation Nuclear Lysate with Histone H3 peptide - mono methyl K36 (ab1783) at 0.5 µg/ml
Lane 4 : Calf Thymus Histone Preparation Nuclear Lysate with Histone H3 peptide - di methyl K36 (ab1784) at 0.5 µg/ml
Lane 5 : Calf Thymus Histone Preparation Nuclear Lysate with Histone H3 peptide - tri methyl K36 (ab1785) at 0.5 µg/ml
Lane 6 : Calf Thymus Histone Preparation Nuclear Lysate with Histone H3 peptide - tri methyl K37 (ab24417) at 0.5 µg/ml

Lysates/proteins at 0.5 µg per lane.

Secondary
Goat polyclonal to Rabbit IgG - H&L - Pre-Adsorbed (HRP) at 1/3000 dilution

Performed under reducing conditions.

Predicted band size : 15 kDa
Observed band size : 17 kDa (why is the actual band size different from the predicted?)

References for Anti-Histone H3 (tri methyl K36) antibody - ChIP Grade (ab9050)

This product has been referenced in:

  • Regnard Cet al. Global Analysis of the Relationship between JIL-1 Kinase and Transcription. PLoS Genet 7:e1001327 (2011). ChIP; Fruit fly (Drosophila melanogaster).Read more (PubMed: 21423663) »
  • Wu SFet al. Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm. Genome Res 21:578-89 (2011). WB; Zebrafish.Read more (PubMed: 21383318) »

See all 85 publications for this product

Publishing research using ab9050? Please let us know so that we can cite the reference in this datasheet

Please note: All products are "FOR RESEARCH USE ONLY AND ARE NOT INTENDED FOR DIAGNOSTIC OR THERAPEUTIC USE"