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  1. Link

    arp5-antibody-ab12099.pdf

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Epigenetics and Nuclear Signaling Chromatin Remodeling INO80
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Validated using a knockout cell line

Anti-Arp5 antibody (ab12099)

  • Datasheet
Reviews (2)Q&A (1)References (9)

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Western blot - Anti-Arp5 antibody (ab12099)
  • Western blot - Anti-Arp5 antibody (ab12099)

Key features and details

  • Rabbit polyclonal to Arp5
  • Suitable for: WB
  • Knockout validated
  • Reacts with: Saccharomyces cerevisiae
  • Isotype: IgG

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Overview

  • Product name

    Anti-Arp5 antibody
  • Description

    Rabbit polyclonal to Arp5
  • Host species

    Rabbit
  • Tested applications

    Suitable for: WBmore details
  • Species reactivity

    Reacts with: Saccharomyces cerevisiae
  • Immunogen

    Recombinant full length protein corresponding to Arp5.

  • Positive control

    • S. cereviseae lysate
  • General notes

    The Life Science industry has been in the grips of a reproducibility crisis for a number of years. Abcam is leading the way in addressing this with our range of recombinant monoclonal antibodies and knockout edited cell lines for gold-standard validation. Please check that this product meets your needs before purchasing.

    If you have any questions, special requirements or concerns, please send us an inquiry and/or contact our Support team ahead of purchase. Recommended alternatives for this product can be found below, along with publications, customer reviews and Q&As

Properties

  • Form

    Liquid
  • Storage instructions

    Shipped at 4°C. Store at +4°C short term (1-2 weeks). Upon delivery aliquot. Store at -20°C or -80°C. Avoid freeze / thaw cycle.
  • Storage buffer

    pH: 7.40
    Preservative: 0.02% Sodium azide
    Constituent: PBS

    Batches of this product that have a concentration < 1mg/ml may have BSA added as a stabilising agent. If you would like information about the formulation of a specific lot, please contact our scientific support team who will be happy to help.
  • Concentration information loading...
  • Purity

    Protein A purified
  • Clonality

    Polyclonal
  • Isotype

    IgG
  • Research areas

    • Epigenetics and Nuclear Signaling
    • Chromatin Remodeling
    • INO80

Associated products

  • Compatible Secondaries

    • Goat Anti-Rabbit IgG H&L (Alexa Fluor® 488) (ab150077)
    • Goat Anti-Rabbit IgG H&L (HRP) (ab205718)
  • Isotype control

    • Rabbit IgG, polyclonal - Isotype Control (ChIP Grade) (ab171870)

Applications

The Abpromise guarantee

Our Abpromise guarantee covers the use of ab12099 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Application Abreviews Notes
WB (1)
Use a concentration of 1 µg/ml. Detects a band of approximately 87 kDa (predicted molecular weight: 87 kDa).
Notes
WB
Use a concentration of 1 µg/ml. Detects a band of approximately 87 kDa (predicted molecular weight: 87 kDa).

Target

  • Relevance

    The budding yeast INO80 complex is a conserved ATP-dependent nucleosome remodeler containing actin-related proteins Arp5 and Arp8. Strains lacking INO80, ARP5, or ARP8 have defects in transcription. Ino80, Arp5, and Arp8 are recruited to an HO-induced DSB, where a phosphorylated form of H2A accumulates. Recruitment of Ino80 is compromised in cells lacking the H2A phosphoacceptor S129. INO80-mediated chromatin remodeling seems to occur directly at DSBs, where it appears to facilitate processing of the lesion.
  • Cellular localization

    Nuclear
  • Database links

    • Entrez Gene: 855665 Saccharomyces cerevisiae
    • SwissProt: P53946 Saccharomyces cerevisiae
    • Alternative names

      • Actin-like protein ARP5 antibody
      • ARP5_YEAST antibody
      • P53946 antibody

    Images

    • Western blot - Anti-Arp5 antibody (ab12099)
      Western blot - Anti-Arp5 antibody (ab12099)
      Anti-Arp5 antibody (ab12099) + S.cerevisiae lysate

      Secondary
      Alexa Fluor Goat polyclonal to Rabbit IgG at 1/10000 dilution

      Predicted band size: 87 kDa
      Observed band size: 90 kDa why is the actual band size different from the predicted?
      Additional bands at: 70 kDa (possible cross reactivity)

    • Western blot - Anti-Arp5 antibody (ab12099)
      Western blot - Anti-Arp5 antibody (ab12099)
      All lanes : Anti-Arp5 antibody (ab12099) at 0.36 µg/ml

      Lane 1 : S. cerevisiae whole cell lysate (wild type)
      Lane 2 : S. cerevisiae whole cell lysate (arp5 knockout)
      Lane 3 : S. cerevisiae whole cell lysate (arp8 knockout)
      Lane 4 : S. cerevisiae whole cell lysate (ino80 knockout)
      Lane 5 : S. cerevisiae whole cell lysate (anc1 knockout)
      Lane 6 : S. cerevisiae whole cell lysate (nhp10 knockout)
      Lane 7 : S. cerevisiae whole cell lysate (wild type, treated with MMS)
      Lane 8 : S. cerevisiae whole cell lysate (arp8 knockout, treated with MMS)

      Predicted band size: 87 kDa
      Observed band size: 100 kDa why is the actual band size different from the predicted?



      Using ab12099, bands were present in all S. cerevisiae strains tested except for an arp5 knockout strain. This provides conclusive evidence that the ab12099 recognises Arp5.

    Protocols

    • ChIP protocols
    • Western blot protocols

    Click here to view the general protocols

    Datasheets and documents

    • Datasheet download

      Download

    References (9)

    Publishing research using ab12099? Please let us know so that we can cite the reference in this datasheet.

    ab12099 has been referenced in 9 publications.

    • Gowans GJ  et al. INO80 Chromatin Remodeling Coordinates Metabolic Homeostasis with Cell Division. Cell Rep 22:611-623 (2018). WB ; Saccharomyces cerevisiae . PubMed: 29346761
    • Xue Y  et al. Mot1, Ino80C, and NC2 Function Coordinately to Regulate Pervasive Transcription in Yeast and Mammals. Mol Cell 67:594-607.e4 (2017). PubMed: 28735899
    • Panday A & Grove A The high mobility group protein HMO1 functions as a linker histone in yeast. Epigenetics Chromatin 9:13 (2016). ChIP . PubMed: 27030801
    • Billant O  et al. The dominant-negative interplay between p53, p63 and p73: A family affair. Oncotarget 7:69549-69564 (2016). WB . PubMed: 27589690
    • Bennett G & Peterson CL SWI/SNF recruitment to a DNA double-strand break by the NuA4 and Gcn5 histone acetyltransferases. DNA Repair (Amst) 30:38-45 (2015). PubMed: 25869823
    • Panday A  et al. Yeast high mobility group protein HMO1 stabilizes chromatin and is evicted during repair of DNA double strand breaks. Nucleic Acids Res 43:5759-70 (2015). ChIP . PubMed: 25979266
    • Xue Y  et al. The Ino80 complex prevents invasion of euchromatin into silent chromatin. Genes Dev 29:350-5 (2015). ChIP-sequencing . PubMed: 25691465
    • Yao W  et al. Assembly of the Arp5 (Actin-related Protein) Subunit Involved in Distinct INO80 Chromatin Remodeling Activities. J Biol Chem 290:25700-9 (2015). PubMed: 26306040
    • Bennett G  et al. DNA repair choice defines a common pathway for recruitment of chromatin regulators. Nat Commun 4:2084 (2013). PubMed: 23811932

    Customer reviews and Q&As

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    Filter by Application

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    1-2 of 2 Abreviews

    ChIP abreview for Anti-Arp5 antibody

    Good
    Abreviews
    Abreviews
    abreview image
    Application
    ChIP
    Detection step
    Other
    Sample
    Saccharomyces cerevisiae Cell lysate - whole cell (Whole cell lysate)
    Specification
    Whole cell lysate
    Negative control
    No Antibody sample
    Type
    Cross-linking (X-ChIP)
    Duration of cross-linking step: 20 minute(s) and 0 second(s)
    Specification of the cross-linking agent: 37% Formaldehyde
    Positive control
    Sample after 1 hour of DNA double strand break
    Read More

    Mr. Arvind Panday

    Verified customer

    Submitted Jul 09 2014

    Western blot abreview for Anti-Arp5 antibody

    Good
    Abreviews
    Abreviews
    abreview image
    Application
    Western blot
    Loading amount
    3.75e+006 cells
    Gel Running Conditions
    Reduced Denaturing (NUPAGE precasted Invitrogen 10% SDS-PAGE)
    Sample
    Schizosaccharomyces pombe Cell lysate - whole cell (whole cell extract)
    Specification
    whole cell extract
    Blocking step
    0.5% BSA + 5% non fat milk as blocking agent for 30 minute(s) · Concentration: 5% · Temperature: 20°C
    Read More

    Abcam user community

    Verified customer

    Submitted Jul 17 2013

    Please note: All products are "FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES"
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