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AB275828

Human QKI knockout U-2 OS cell line

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QKI KO cell line available to order. KO validated by Next Generation Sequencing. Free of charge wild type control provided. Knockout achieved by CRISPR/Cas9 X = 1 bp deletion Frameshift: 100%.

View Alternative Names

DKFZp586I0923, HKQ, HQK1, Homolog of mouse quaking QKI KH domain RNA binding protein, Hqk, HqkI, OTTHUMP00000017581, OTTHUMP00000017582, OTTHUMP00000017583, Protein quaking, QK, QK1, QK3, QKI1, QKI_HUMAN, Quaking homolog, Quaking homolog KH domain RNA binding, Quaking homolog KH domain RNA binding mouse, Quaking isoform 1, Quaking protein, RNA binding protein HQK

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Next Generation Sequencing - Human QKI knockout U-2 OS cell line (AB275828)
  • NGS

Supplier Data

Next Generation Sequencing - Human QKI knockout U-2 OS cell line (AB275828)

Knockout achieved by CRISPR/Cas9; X = 1 bp deletion; Frameshift : 100%

Key facts

Cell type

U-2 OS

Species or organism

Human

Tissue

Bone

Form

Liquid

form

Knockout validation

Next Generation Sequencing

Mutation description

Knockout achieved by CRISPR/Cas9 X = 1 bp deletion Frameshift: 100%

Disease

Osteosarcoma

Reactivity data

{ "title": "Reactivity Data", "filters": { "stats": ["", "Reactivity", "Dilution Info", "Notes"] }, "values": { "NGS": { "reactivity":"TESTED_AND_REACTS", "dilution-info":"", "notes":"<p></p>" } } }

Product details

Recommended control: Human wild-type U-2 OS cell line (ab263976). Please note a wild-type cell line is not automatically included with a knockout cell line order, if required please add recommended wild-type cell line at no additional cost using the code WILDTYPE-TMTK1.

We will provide viable cells that proliferate on revival.

This product is subject to limited use licenses from The Broad Institute and ERS Genomics Limited, and is developed with patented technology. For full details of the limited use licenses and relevant patents please refer to our limited use license and patent pages.

What's included?

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Properties and storage information

Gene name
QKI
Gene editing type
Knockout
Gene editing method
CRISPR technology
Knockout validation
Next Generation Sequencing
Shipped at conditions
Dry Ice
Appropriate short-term storage duration
1-2 weeks
Appropriate short-term storage conditions
-196°C|-80°C
Appropriate long-term storage conditions
-196°C

Handling procedures

Initial handling guidelines

Upon arrival, the vial should be stored in liquid nitrogen vapor phase and not at -80°C. Storage at -80°C may result in loss of viability.

1. Thaw the vial in 37°C water bath for approximately 1-2 minutes.
2. Transfer the cell suspension (0.8 mL) to a 15 mL/50 mL conical sterile polypropylene centrifuge tube containing 8.4 mL pre-warmed culture medium, wash vial with an additional 0.8 mL culture medium (total volume 10 mL) to collect remaining cells, and centrifuge at 201 x g (rcf) for 5 minutes at room temperature. 10 mL represents minimum recommended dilution. 20 mL represents maximum recommended dilution.
3. Resuspend the cell pellet in 5 mL pre-warmed culture medium and count using a haemocytometer or alternative cell counting method seed all remaining cells into a T25.
4. Incubate the culture at 37°C incubator with 5% CO2. Check the culture one day after revival and continue to check until 80% confluent. Media change can be given if needed.
5. Once confluent passage into an appropriate flask at a density of 2x104 cells/cm2. Seeding density is given as a guide only and should be scaled to align with individual lab schedules. Cultures should be monitored daily.

Subculture guidelines
  • All seeding densities should be based on cell counts gained by established methods.
  • A guide seeding density of 2x104 cells/cm2 is recommended.
  • Cells should be passaged when they have achieved 80-90% confluence.
Culture medium

McCoY5a + 10% FBS

Cryopreservation medium

Cell Freezing Medium-DMSO Serum free media, contains 8.7% DMSO in MEM supplemented with methyl cellulose.

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

The QKI protein also known as Quaking is an RNA-binding protein belonging to the STAR (Signal Transduction and Activation of RNA) family. It plays an important role in RNA metabolism including the regulation of alternative splicing RNA stability and translation. QKI with a molecular mass of approximately 38 kDa is widely expressed in mammals especially in the central nervous system and the heart. Its presence in various tissues highlights its broad biological relevance and necessity in maintaining cellular function.
Biological function summary

QKI functions in regulating mRNA which is essential for proper cell differentiation and development. This protein is not known to be part of a larger complex but interacts with various RNA substrates and auxiliary proteins to exert its functions. QKI's actions impact neural tissue development and lipid metabolism by modulating the splicing of target RNA molecules. It also influences myelination in the nervous system by controlling key mRNAs involved in the process.

Pathways

QKI plays key roles in two important signaling pathways: the Wnt/β-catenin and the AKT signaling pathways. In the Wnt pathway QKI modulates gene expression by influencing mRNA transcripts involved in cell fate and proliferation. Through its participation in AKT signaling QKI links to proteins like PI3K and mTOR essential for cell survival and growth. These pathways illustrate QKI's influence in both neural and systemic biological processes.

QKI is linked to neurodevelopmental disorders and schizophrenia. Abnormal expression or mutations in QKI can lead to neurological dysfunction highlighting its significance in brain health. Schizophrenia associations involve dysregulation of QKI's RNA targets that affect synaptic functioning. Additionally QKI's interactions with proteins such as hnRNP K and KHDRBS1 show the interconnected nature of its role in these complex conditions.

Quality control

STR analysis

CSF1PO, D13S317, D7S820, D5S818, TH01, D16S539, TPOX

Cell culture

Biosafety level

EU: 1 US: 1

Adherent/suspension

Adherent

Gender

Female

Product protocols

Product promise

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