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AB266800

Human RBM42 knockout HEK-293T cell line

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RBM42 KO cell line available to order. KO validated by. Free of charge wild type control provided. Knockout achieved by using CRISPR/Cas9, Homozygous: 40 bp deletion in exon 1.

View Alternative Names

MGC10433, RNA binding motif protein 42, RNA binding protein 42

1 Images
Sanger Sequencing - Human RBM42 knockout HEK-293T cell line (AB266800)
  • Sanger seq

Unknown

Sanger Sequencing - Human RBM42 knockout HEK-293T cell line (AB266800)

Homozygous : 40 bp deletion in exon 1

Key facts

Cell type

HEK-293T

Species or organism

Human

Tissue

Kidney

Form

Liquid

form

Knockout validation

Sanger Sequencing

Mutation description

Knockout achieved by using CRISPR/Cas9, Homozygous: 40 bp deletion in exon 1

Product details

Recommended control: Human wild-type HEK293T cell line (ab255449). Please note a wild-type cell line is not automatically included with a knockout cell line order, if required please add recommended wild-type cell line at no additional cost using the code WILDTYPE-TMTK1.

We will provide viable cells that proliferate on revival.

This product is subject to limited use licenses from The Broad Institute and ERS Genomics Limited, and is developed with patented technology. For full details of the limited use licenses and relevant patents please refer to our limited use license and patent pages.

What's included?

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Properties and storage information

Gene name
RBM42
Gene editing type
Knockout
Gene editing method
CRISPR technology
Knockout validation
Sanger Sequencing
Zygosity
Homozygous
Shipped at conditions
Dry Ice
Appropriate short-term storage conditions
-196°C
Appropriate long-term storage conditions
-196°C

Handling procedures

Initial handling guidelines

Upon arrival, the vial should be stored in liquid nitrogen vapor phase and not at -80°C. Storage at -80°C may result in loss of viability.

1. Thaw the vial in 37°C water bath for approximately 1-2 minutes.
2. Transfer the cell suspension (0.8 mL) to a 15 mL/50 mL conical sterile polypropylene centrifuge tube containing 8.4 mL pre-warmed culture medium, wash vial with an additional 0.8 mL culture medium (total volume 10 mL) to collect remaining cells, and centrifuge at 201 x g (rcf) for 5 minutes at room temperature. 10 mL represents minimum recommended dilution. 20 mL represents maximum recommended dilution.
3. Resuspend the cell pellet in 5 mL pre-warmed culture medium and count using a haemocytometer or alternative cell counting method seed all remaining cells into a T25.
4. Incubate the culture at 37°C incubator with 5% CO2. Check the culture one day after revival and continue to check until 80% confluent. Media change can be given if needed.
5. Once confluent passage into an appropriate flask at a density of 2x104 cells/cm2. Seeding density is given as a guide only and should be scaled to align with individual lab schedules. Cultures should be monitored daily.

Subculture guidelines
  • All seeding densities should be based on cell counts gained by established methods.
  • A guide seeding density of 2x104 cells/cm2 is recommended.
  • Cells should be passaged when they have achieved 80-90% confluence.
Culture medium

DMEM (High Glucose) + 10% FBS

Cryopreservation medium

Cell Freezing Medium-DMSO Serum free media, contains 8.7% DMSO in MEM supplemented with methyl cellulose.

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

RBM42 also known as RNA-binding motif protein 42 functions as an RNA-binding protein. It belongs to a family characterized by its ability to interact with RNA molecules. RBM42 has a molecular mass of around 40 kDa. Expression occurs mainly in the nucleus of cells indicating its role in post-transcriptional genetic processes. Studies found high expression levels in tissues like the brain and testis suggesting specialized functions in these regions.
Biological function summary

RBM42 influences the splicing and processing of mRNA transcripts. It interacts directly with pre-mRNA molecules implicating it in the regulation of gene expression. This protein does not function in isolation; it becomes a part of complexes with other splicing factors which cooperate to ensure accurate splicing. These interactions help maintain cellular processes that rely on correctly processed RNA.

Pathways

RBM42 interacts significantly in mRNA processing and splicing pathways. It influences pathways like the spliceosome cycle important for generating diverse protein isoforms necessary for cellular function. RBM42 works along with other RNA-binding proteins like RBM39 enhancing the splicing repertoire within cells. These interactions streamline the gene expression processes ultimately controlling how cells respond to different physiological stimuli.

Improper RBM42 function links to neurodegenerative disorders and cancers. Its malfunction can affect the alternative splicing of genes important for brain health contributing to conditions like Alzheimer's disease through connections with proteins like TDP-43. Additionally dysregulation may lead to abnormal cell proliferation and survival linked to cancers where RBM42 interacts with factors involved in cell cycle regulation altering cellular growth and division.

Quality control

STR analysis

CSF1PO, D13S317, D7S820, D5S818, TH01, D16S539, TPOX

Cell culture

Biosafety level

EU: 2 US: 2

Adherent/suspension

Adherent

Gender

Female

Product protocols

Product promise

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