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AB266476

Human TRABD (TraB domain containing) knockout HEK-293T cell line

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TRABD KO cell line available to order. KO validated by. Free of charge wild type control provided. Knockout achieved by using CRISPR/Cas9, 1 bp insertion in exon 4 and 4 bp deletion in exon 4.

View Alternative Names

LP6054, MGC110928, PP2447, RP3 402G11.12, TRABD, TraB domain containing

2 Images
Sanger Sequencing - Human TRABD (TraB domain containing) knockout HEK-293T cell line (AB266476)
  • Sanger seq

Unknown

Sanger Sequencing - Human TRABD (TraB domain containing) knockout HEK-293T cell line (AB266476)

Allele-1 : 4 bp deletion in exon4

Sanger Sequencing - Human TRABD (TraB domain containing) knockout HEK-293T cell line (AB266476)
  • Sanger seq

Unknown

Sanger Sequencing - Human TRABD (TraB domain containing) knockout HEK-293T cell line (AB266476)

Allele-2 : 1 bp insertion in exon 4.

Key facts

Cell type

HEK-293T

Species or organism

Human

Tissue

Kidney

Form

Liquid

form

Knockout validation

Sanger Sequencing

Mutation description

Knockout achieved by using CRISPR/Cas9, 1 bp insertion in exon 4 and 4 bp deletion in exon 4

Product details

Recommended control: Human wild-type HEK293T cell line (ab255449). Please note a wild-type cell line is not automatically included with a knockout cell line order, if required please add recommended wild-type cell line at no additional cost using the code WILDTYPE-TMTK1.

We will provide viable cells that proliferate on revival.

This product is subject to limited use licenses from The Broad Institute, ERS Genomics Limited and Sigma-Aldrich Co. LLC, and is developed with patented technology. For full details of the licenses and patents please refer to our limited use license and patent pages.

What's included?

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Properties and storage information

Gene name
TRABD
Gene editing type
Knockout
Gene editing method
CRISPR technology
Knockout validation
Sanger Sequencing
Shipped at conditions
Dry Ice
Appropriate short-term storage conditions
-196°C
Appropriate long-term storage conditions
-196°C

Handling procedures

Initial handling guidelines

Upon arrival, the vial should be stored in liquid nitrogen vapor phase and not at -80°C. Storage at -80°C may result in loss of viability.

1. Thaw the vial in 37°C water bath for approximately 1-2 minutes.
2. Transfer the cell suspension (0.8 mL) to a 15 mL/50 mL conical sterile polypropylene centrifuge tube containing 8.4 mL pre-warmed culture medium, wash vial with an additional 0.8 mL culture medium (total volume 10 mL) to collect remaining cells, and centrifuge at 201 x g (rcf) for 5 minutes at room temperature. 10 mL represents minimum recommended dilution. 20 mL represents maximum recommended dilution.
3. Resuspend the cell pellet in 5 mL pre-warmed culture medium and count using a haemocytometer or alternative cell counting method seed all remaining cells into a T25.
4. Incubate the culture at 37°C incubator with 5% CO2. Check the culture one day after revival and continue to check until 80% confluent. Media change can be given if needed.
5. Once confluent passage into an appropriate flask at a density of 2x104 cells/cm2. Seeding density is given as a guide only and should be scaled to align with individual lab schedules. Cultures should be monitored daily.

Subculture guidelines
  • All seeding densities should be based on cell counts gained by established methods.
  • A guide seeding density of 2x104 cells/cm2 is recommended.
  • Cells should be passaged when they have achieved 80-90% confluence.
Culture medium

DMEM (High Glucose) + 10% FBS

Cryopreservation medium

Cell Freezing Medium-DMSO Serum free media, contains 8.7% DMSO in MEM supplemented with methyl cellulose.

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

The TraB domain containing protein functions mechanically as a facilitator for DNA transfer during bacterial conjugation. This protein aids in the transport of DNA across the cell membrane playing a critical role in gene exchange processes. Often referred to by various names such as conjugation protein TraB or transfer binding domain protein it has an estimated mass around 50 kDa. TraB is typically expressed in bacteria where it ensures the proper transfer of genetic material between cells harnessing energy from ATP to drive this process efficiently.
Biological function summary

TraB domain containing proteins enable horizontal gene transfer which significantly impacts genetic diversity and adaptation in bacterial populations. It constitutes a part of the larger conjugative transfer machinery complex that involves multiple proteins. This complex facilitates the binding and unwinding of DNA which is essential for conjugation. TraB works in association with membrane-associated proteins to ensure successful DNA passage into the recipient cell reflecting its importance in cellular adaptability and survival under various environmental conditions.

Pathways

These proteins serve a vital function within the bacterial conjugation pathway — a fundamental mechanism contributing to antibiotic resistance spread. TraB operates in coordination with proteins such as TraC or TraG which form part of the transfer complex. These proteins orchestrate the conjugation process ensuring the precise transfer of DNA molecules working as a liaison among the numerous proteins involved in this method. The integration of TraB within these pathways demonstrates its role in promoting gene transfer which bacteria use to acquire new traits rapidly including antibiotic resistance.

TraB-related processes have considerable implications on the progression of antibiotic resistance in bacterial infections. The spread of antibiotic-resistant genes through TraB-mediated conjugation poses significant challenges in treating diseases like MRSA (Methicillin-resistant Staphylococcus aureus). TraB connects with other proteins like TraA or TraD facilitating resistance gene dissemination within bacterial communities. Understanding TraB's function and its interactions with these proteins is essential in developing strategies to combat the growing public health threat posed by antibiotic-resistant bacterial strains.

Quality control

STR analysis

CSF1PO, D13S317, D7S820, D5S818, TH01, D16S539, TPOX

Cell culture

Biosafety level

EU: 2 US: 2

Adherent/suspension

Adherent

Gender

Female

Product protocols

Product promise

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