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AB277987

Human ATR knockout (hetero) A549 cell lysate

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ATR KO cell lysate available now. KO validated by Western blot. Free of charge wild type control included. Knockout achieved by using CRISPR/Cas9, Heterozygous: (+/-): 49 bp deletion in exon 3.

View Alternative Names

ATR_HUMAN, Ataxia telangiectasia and Rad3 related, Ataxia telangiectasia and Rad3-related protein, FCTCS, FRAP-related protein 1, FRP-1, MEC1, MEC1 mitosis entry checkpoint 1 homolog, Protein kinase ATR, Rad3 related protein, SCKL, SCKL1, Serine/threonine-protein kinase ATR

2 Images
Western blot - Human ATR knockout (hetero) A549 cell lysate (AB277987)
  • WB

Lab

Western blot - Human ATR knockout (hetero) A549 cell lysate (AB277987)

Lane 1 : Wild-type A549 cell lysate 20 ug
Lane 2 : ATR heterozygous knockout A549 cell lysate 20 ug
Lane 3 : HeLa cell lysate 20 ug

Western blot : Anti-ATR antibody staining at 1/15000 dilution, shown in green; Mouse anti-Alpha Tubulin [DM1A] (ab7291) loading control staining at 1/20000 dilution, shown in red.
In Western blot, ab10312 was shown to bind specifically to ATR. A band was observed at 260 kDa in wild-type A549 cell lysates with a reduction in signal observed at this size in ATR heterozygous knockout cell line ab276104 (knockout cell lysate ab277987). To generate this image, wild-type and ATR heterozygous knockout A549 cell lysates were analysed.
Nitrocellulose membranes were blocked in 3 % milk in TBS-0.1 % Tween® 20 (TBS-T) before incubation with primary antibodies overnight at 4°C. Blots were washed in TBS-T, incubated with secondary antibodies for 1 h at room temperature, washed again then imaged.

Secondary antibodies used were Goat anti-Rabbit IgG H&L (IRDye® 800CW) preabsorbed (ab216773) and Goat anti-Mouse IgG H&L (IRDye® 680RD) preabsorbed (ab216776) at 1/20000 dilution.

All lanes:

Western blot - Anti-ATR antibody (<a href='/en-us/products/primary-antibodies/atr-antibody-ab10312'>ab10312</a>) at 1/15000 dilution

Lane 1:

Wild-type A549 cell lysate at 20 µg

Lane 2:

ATR knockout A549 cell lysate at 20 µg

Lane 2:

Western blot - Human ATR knockout (hetero) A549 cell line (<a href='/en-us/products/cell-lines/human-atr-knockout-hetero-a549-cell-line-ab276104'>ab276104</a>)

Lane 3:

HeLa cell lysate at 20 µg

Predicted band size: 301 kDa

Observed band size: 260 kDa

false

Sanger Sequencing - Human ATR knockout (hetero) A549 cell lysate (AB277987)
  • Sanger seq

Unknown

Sanger Sequencing - Human ATR knockout (hetero) A549 cell lysate (AB277987)

Heterozygous (+/-) : 49 bp deletion in exon 3.

Key facts

Cell type

A549

Species or organism

Human

Tissue

Lung

Knockout validation

Sanger Sequencing,Western blot

Mutation description

Knockout achieved by using CRISPR/Cas9, Heterozygous: (+/-): 49 bp deletion in exon 3

Disease

Carcinoma

Reactivity data

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Product details

Knockout cell lysate achieved by CRISPR/Cas9.

REACH authorisation
Abcam has not and does not intend to apply for the REACH Authorisation of customers' uses of products that contain European Authorisation list (Annex XIV) substances.
It is the responsibility of our customers to check the necessity of application of REACH Authorisation, and any other relevant authorisations, for their intended uses.

Lysate preparation: Our lysates are made using RIPA buffer to which we add a protease inhibitor cocktail and phosphatase inhibitor cocktail (ratio: 300:100:10). This means that the protein of interest is denatured. If you require a native form of the protein please use the live cell version. Please refer to our lysis protocol for further details on how our lysates are prepared.

User storage instructions: Lyophilizate may be stored at 4°C. After reconstitution, store at -20°C for short-term storage or -80°C for long-term storage.

This product is subject to limited use licenses from The Broad Institute and ERS Genomics Limited, and is developed with patented technology. For full details of the limited use licenses and relevant patents please refer to our limited use license and patent pages.

What's included?

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Properties and storage information

Gene name
ATR
Gene editing type
Knockout
Gene editing method
CRISPR technology
Knockout validation
Sanger Sequencing, Western blot
Zygosity
Heterozygous
Shipped at conditions
Ambient - Can Ship with Ice
Appropriate short-term storage conditions
-80°C
Appropriate long-term storage conditions
-80°C

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

ATR also known as Ataxia Telangiectasia and Rad3-related protein is a serine/threonine kinase with a molecular weight of approximately 301 kDa. This protein localizes mainly in the nucleus where it functions as an important component in the cellular response to DNA damage and replication stress. ATR detects DNA strand breaks and ssDNA coated with RPA and becomes activated to phosphorylate several downstream targets initiating the DNA damage response. High expression of ATR occurs in proliferative tissues emphasizing its role in cell cycle regulation.
Biological function summary

ATR plays an essential role in maintaining genomic stability. It is part of a larger protein complex that includes ATRIP (ATR-interacting protein) which helps in localizing ATR to sites of DNA damage. Once activated ATR phosphorylates various substrates including CHK1 a critical checkpoint kinase involved in cell cycle arrest during DNA repair processes. The ability of ATR to coordinate with these proteins helps cells manage DNA damage effectively and prevent genomic instability.

Pathways

ATR functions centrally in the DNA damage response and repair mechanisms particularly the ATR-Chk1 pathway. This pathway interacts closely with the ATM (Ataxia Telangiectasia Mutated) pathway which also responds to DNA damage but usually to double-strand breaks. ATR primarily acts in response to replication stress and its activation leads to the arrest of the cell cycle allowing DNA repair to occur. This cooperation between ATR and ATM highlights their complementary roles in safeguarding genomic integrity under stress.

ATR mutations and dysregulation have strong associations with cancer and Seckel syndrome. In the context of cancer ATR often works in concert with ATM to manage DNA repair and cancer cells frequently overexpress ATR to cope with high levels of replication stress. This makes ATR a potential target for cancer therapy where its inhibition could sensitize tumor cells to chemotherapy. In Seckel syndrome ATR mutations result in developmental anomalies showcasing the important role ATR plays in cellular replication and repair processes.

Quality control

STR analysis

CSF1PO, D13S317, D7S820, D5S818, TH01, D16S539, TPOX

Cell culture

Biosafety level

EU: 1 US: 1

Adherent/suspension

Adherent

Gender

Male

Product protocols

Product promise

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