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AB73938

Anti-5-methylcytosine (5-mC) antibody [5MC-CD]

3

(2 Reviews)

|

(43 Publications)

Mouse Monoclonal 5-Methylcytosine antibody. Suitable for SB, ICC/IF and reacts with Chemical samples. Cited in 43 publications. Immunogen corresponding to Chemical / Small Molecule corresponding to 5-Methylcytosine.
2 Images
Immunocytochemistry/ Immunofluorescence - Anti-5-methylcytosine (5-mC) antibody [5MC-CD] (AB73938)
  • ICC/IF

PubMed

Immunocytochemistry/ Immunofluorescence - Anti-5-methylcytosine (5-mC) antibody [5MC-CD] (AB73938)

ab73938 staining 5-Methyl Cytosine in murine PN5 zygotes by Immunocytochemistry/ Immunofluorescence.

Cells were fixed with methanol/acetic acid (3 : 1) and blocked with 30% serum for overnight a 4°C. Samples were incubated with primary antibody (1/100 in diluent) for 18 hours at 4°C before detection with a fluorescent secondary antibody.

Image from Li Y & O'Neill C.,PLoS One. 2012;7(1):e30687. Epub 2012 Jan 26. Fig 5.; doi:10.1371/journal.pone.0030687; January 26, 2012, PLoS ONE 7(1): e30687.

Immunocytochemistry/ Immunofluorescence - Anti-5-methylcytosine (5-mC) antibody [5MC-CD] (AB73938)
  • ICC/IF

Unknown

Immunocytochemistry/ Immunofluorescence - Anti-5-methylcytosine (5-mC) antibody [5MC-CD] (AB73938)

Methylation of chloroplast DNA visualized by immunochemistry. Samples are Chlamydomonas me-1 cells. Left : DAPI-stained cells. Middle : Cells stained with ab73938 and FITC-conjugated 2nd antibody. Right : Merged image. Chloroplast DNA is exclusively methylated in gamete cells

  • 519 FITC

    FITC Anti-5-methylcytosine (5-mC) antibody [5MC-CD]

  • Biotin

    Biotin Anti-5-methylcytosine (5-mC) antibody [5MC-CD] - Azide free

Key facts

Host species

Mouse

Clonality

Monoclonal

Clone number

5MC-CD

Isotype

IgM

Carrier free

No

Applications

SB, ICC/IF

applications

Specificity

ab73938 reacts with DNA with 5-Methylcytosine (methylated DNA).

Reactivity data

{ "title": "Reactivity Data", "filters": { "stats": ["", "Species", "Dilution Info", "Notes"], "tabs": { "all-applications": {"fullname" : "All Applications", "shortname": "All Applications"}, "SB" : {"fullname" : "Southern Blot", "shortname":"SB"}, "ICCIF" : {"fullname" : "Immunocytochemistry/ Immunofluorescence", "shortname":"ICC/IF"} }, "product-promise": { "all": "all", "testedAndGuaranteed": "tested", "guaranteed": "expected", "predicted": "predicted", "notRecommended": "not-recommended" } }, "values": { "Chemical": { "SB-species-checked": "guaranteed", "SB-species-dilution-info": "1/1000", "SB-species-notes": "<p>Immunoblotting - detection of DNA with 5-methylocytosine on nitrocellulose. Use at 1/1000</p>", "ICCIF-species-checked": "testedAndGuaranteed", "ICCIF-species-dilution-info": "1/50 - 1/100", "ICCIF-species-notes": "<p>Recommend fixing in 4% PFA followed by denaturation with 70% formamide in 2x SSC and chilling in 70%, 95%, and 99% EtOH for 2 min each. Diluting antibody in SSC (saline sodium citrate) may give optimal results. See protocols from PubMed: 11983892 and 17994007</p>" } } }

Properties and storage information

Form
Liquid
Purification notes
ab73938 is purified and filter-sterilised.
Storage buffer
pH: 6 - 8.5 Constituents: PBS, 50% Glycerol (glycerin, glycerine)
Shipped at conditions
Blue Ice
Appropriate short-term storage conditions
+4°C
Appropriate long-term storage conditions
-20°C
Aliquoting information
Upon delivery aliquot
Storage information
Avoid freeze / thaw cycle

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

5-methylcytosine often referred to as 5-mC 5-methyl cytosine or 5-methylcytidine is a methylated form of the nucleobase cytosine found in the DNA of various organisms. This modification typically occurs at the carbon 5 position of the cytosine ring contributing to the epigenetic regulation of gene expression. While the mass of 5-mC itself is relatively small since it is a modified nucleotide its impact on gene regulation is significant. 5-mC is widely expressed in the genome of higher eukaryotes particularly in CpG dinucleotides where it plays a role in mammalian development and cell differentiation.
Biological function summary

Cytosine methylation affects DNA-protein interactions leading to changes in chromatin structure and the regulation of gene activity. 5-methylcytosine is an important player in the chromatin modification complex where it collaborates with other epigenetic marks to control gene expression profiles. This modified nucleotide helps to stabilize gene silencing maintaining the closed chromatin state which inhibits the transcription machinery's access to specific genomic regions. Such silencing is vital during processes like X-chromosome inactivation and imprinting.

Pathways

Researchers have identified 5-mC within two critical pathways: DNA methylation and demethylation cycle and histone modification pathway. In the DNA methylation pathway 5-mC interacts closely with proteins like DNA methyltransferases (DNMTs) which directly add methyl groups to cytosine bases. In the context of histone modification 5-mC influences the binding of methyl-CpG-binding domain (MBD) proteins which read and interpret methylated DNA marks affecting histone modification and DNA accessibility.

The dysregulation of 5-methylcytosine patterns associates prominently with cancer and neurological disorders. Abnormal methylation patterns where 5-mC is either hypermethylated or hypomethylated can lead to the silencing of tumor suppressor genes or activation of oncogenes forming a basis for cancer development. In neurological disorders altered 5-mC levels link to conditions such as Rett syndrome where the dysfunction of the associated protein MeCP2 an important reader of 5-mC contributes to the disease pathology.

Product protocols

For this product, it's our understanding that no specific protocols are required. You can visit:

Publications (43)

Recent publications for all applications. Explore the full list and refine your search

BMC plant biology 25:998 PubMed40745527

2025

Transgenerational genetic and epigenetic changes induced by gamma-ray in Fagopyrum species.

Applications

Unspecified application

Species

Unspecified reactive species

Katarzyna Sala-Cholewa,Magdalena Rojek-Jelonek,Jolanta Kwasniewska

Epigenetics & chromatin 18:43 PubMed40660336

2025

Introduction of epigenetic variation contribute to resistance against the human parasite Schistosoma mansoni.

Applications

Unspecified application

Species

Unspecified reactive species

Nelia Luviano-Aparicio,Marie Lopez,Bart Haegeman,Pierick Mouginot,Cristian Chaparro,Paola B Arimondo,Benoit Pujol,Céline Cosseau,Christoph Grunau

BMC plant biology 25:463 PubMed40217153

2025

Demethylating drugs alter protoplast development, regeneration, and the genome stability of protoplast-derived regenerants of cabbage.

Applications

Unspecified application

Species

Unspecified reactive species

Agnieszka Kiełkowska,Agnieszka Brąszewska

eLife 13: PubMed39642055

2024

Maternal obesity may disrupt offspring metabolism by inducing oocyte genome hyper-methylation via increased DNMTs.

Applications

Unspecified application

Species

Unspecified reactive species

Shuo Chao,Jun Lu,Li-Jun Li,Hong-Yan Guo,Kuipeng Xu,Ning Wang,Shu-Xian Zhao,Xiao-Wen Jin,Shao-Ge Wang,Shen Yin,Wei Shen,Ming-Hui Zhao,Gui-An Huang,Qing-Yuan Sun,Zhao-Jia Ge

BMC plant biology 24:448 PubMed38783206

2024

DNA methylation analysis of floral parts revealed dynamic changes during the development of homostylous Fagopyrum tataricum and heterostylous F. esculentum flowers.

Applications

Unspecified application

Species

Unspecified reactive species

Katarzyna Sala-Cholewa,Alicja Tomasiak,Katarzyna Nowak,Artur Piński,Alexander Betekhtin

Methods in molecular biology (Clifton, N.J.) 2791:15-22 PubMed38532088

2024

Immunostaining for Epigenetic Modifications in Fagopyrum Calli.

Applications

Unspecified application

Species

Unspecified reactive species

Alicja Tomasiak,Katarzyna Sala,Agnieszka Braszewska

mBio 15:e0317723 PubMed38294217

2024

N6-methyloxyadenine-mediated detoxification and ferroptosis confer a trade-off between multi-fungicide resistance and fitness.

Applications

Unspecified application

Species

Unspecified reactive species

Borui Zhang,Zhiwen Wang,Sicong Zhang,Shan Zhong,Ye Sun,Xili Liu

The Journal of clinical investigation 133: PubMed37643007

2023

The CTBP2-PCIF1 complex regulates m6Am modification of mRNA in head and neck squamous cell carcinoma.

Applications

Unspecified application

Species

Unspecified reactive species

Kang Li,Jie Chen,Caihua Zhang,Maosheng Cheng,Shuang Chen,Wei Song,Chunlong Yang,Rongsong Ling,Zhi Chen,Xiaochen Wang,Gan Xiong,Jieyi Ma,Yan Zhu,Quan Yuan,Qi Liu,Liang Peng,Qianming Chen,Demeng Chen

BMC plant biology 23:445 PubMed37735356

2023

Multi-omics insights into the positive role of strigolactone perception in barley drought response.

Applications

Unspecified application

Species

Unspecified reactive species

Agata Daszkowska-Golec,Devang Mehta,R Glen Uhrig,Agnieszka Brąszewska,Ondrej Novak,Irene M Fontana,Michael Melzer,Tomasz Płociniczak,Marek Marzec

Journal of biomedical research 36:269-279 PubMed35965436

2022

Fidgetin knockdown and knockout influences female reproduction distinctly in mice.

Applications

Unspecified application

Species

Unspecified reactive species

Cong-Rong Li,Ruo-Lei Wang,Shi-Ya Xie,Yan-Ru Li,Lei-Lei Gao,Zhi-Xia Yang,Dong Zhang
View all publications

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