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AB202894

Anti-Aly/Ref antibody [EPR17942]

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(18 Publications)

Anti-Aly/Ref antibody [EPR17942] (ab202894) is a rabbit monoclonal antibody detecting Aly/Ref in Western Blot, Flow Cytometry (Intra), IP, IHC-P, ICC/IF. Suitable for Human, Mouse, Rat.

- Biophysical QC for unrivalled batch-batch consistency

View Alternative Names

ALY, BEF, THOC4, ALYREF, THO complex subunit 4, Tho4, Ally of AML-1 and LEF-1, Aly/REF export factor, Transcriptional coactivator Aly/REF, bZIP-enhancing factor BEF

10 Images
Flow Cytometry (Intracellular) - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • Flow Cyt (Intra)

Supplier Data

Flow Cytometry (Intracellular) - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Intracellular flow cytometric analysis of 4% paraformaldehyde-fixed HeLa (Human epithelial cells from cervix adenocarcinoma) cells labeling Aly/Ref with ab202894 at 1/150 dilution (red) compared with a rabbit monoclonal IgG isotype control (ab172730; black) and an unlabelled control (cells without incubation with primary antibody and secondary antibody; blue). Goat anti rabbit IgG (FITC) at 1/500 dilution was used as the secondary antibody.

Immunocytochemistry/ Immunofluorescence - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • ICC/IF

Supplier Data

Immunocytochemistry/ Immunofluorescence - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Immunofluorescent analysis of 4% paraformaldehyde-fixed, 0.1% Triton X-100 permeabilized HeLa (Human epithelial cells from cervix adenocarcinoma) cells labeling Aly/Ref with ab202894 at 1/250 dilution, followed by Goat anti-rabbit IgG (Alexa Fluor® 488) (ab150077) secondary antibody at 1/1000 dilution (green). Confocal image showing nuclear staining on HeLa cell line. The nuclear counter stain is DAPI (blue). Tubulin is detected with ab7291 (anti-Tubulin mouse mAb) at 1/1000 dilution and ab150120 (AlexaFluor®594 Goat anti-Mouse secondary) at 1/1000 dilution (red).

The negative controls are as follows :
-ve control 1 : ab202894 at 1/250 dilution followed by ab150120 (AlexaFluor®594 Goat anti-Mouse secondary) at 1/1000 dilution.
-ve control 2 : ab7291 (anti-Tubulin mouse mAb) at 1/1000 dilution followed by ab150077 (Alexa Fluor®488 Goat Anti-Rabbit IgG H&L) at 1/1000 dilution.

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • IHC-P

Supplier Data

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Immunohistochemical analysis of paraffin-embedded Human cervix carcinoma tissue labeling Aly/Ref with ab202894 at 1/500 dilution, followed by Goat Anti-Rabbit IgG H&L (HRP) (ab97051) secondary antibody at 1/500 dilution. Nuclear and weakly cytoplasmic staining on Human cervix carcinoma tissue is observed. Counter stained with Hematoxylin.

Secondary antibody only control : Used PBS instead of primary antibody, secondary antibody is Goat Anti-Rabbit IgG H&L (HRP) (ab97051) at 1/500 dilution.

Perform heat mediated antigen retrieval with Tris/EDTA buffer pH 9.0 before commencing with IHC staining protocol.

Immunoprecipitation - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • IP

Supplier Data

Immunoprecipitation - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Aly/Ref was immunoprecipitated from 1mg of HepG2 (Human liver hepatocellular carcinoma) whole cell lysate with ab202894 at 1/40 dilution. Western blot was performed from the immunoprecipitate using ab202894 at 1/5000 dilution. Anti-Rabbit IgG (HRP), specific to the non-reduced form of IgG, was used as secondary antibody at 1/1500 dilution.

Lane 1 : HepG2 whole cell lysate 10 μg (Input). Lane 2 : ab202894 IP in HepG2 whole cell lysate. Lane 3 : Rabbit monoclonal IgG (ab172730) instead of ab202894 in HepG2 whole cell lysate.

Blocking and dilution buffer and concentration : 5% NFDM/TBST.

Exposure time : 8 seconds.

All lanes:

Immunoprecipitation - Anti-Aly/Ref antibody [EPR17942] (ab202894)

Predicted band size: 27 kDa

false

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • IHC-P

Supplier Data

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Immunohistochemical analysis of paraffin-embedded mouse cerebral cortex tissue labeling Aly/Ref with ab202894 at 1/500 dilution, followed by Goat Anti-Rabbit IgG H&L (HRP) (ab97051) secondary antibody at 1/500 dilution. Nuclear and weakly cytoplasmic staining on mouse cerebral cortex tissue is observed. Counter stained with Hematoxylin.

Secondary antibody only control : Used PBS instead of primary antibody, secondary antibody is Goat Anti-Rabbit IgG H&L (HRP) (ab97051) at 1/500 dilution.

Perform heat mediated antigen retrieval with Tris/EDTA buffer pH 9.0 before commencing with IHC staining protocol.

Immunocytochemistry/ Immunofluorescence - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • ICC/IF

Supplier Data

Immunocytochemistry/ Immunofluorescence - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Immunofluorescent analysis of 4% paraformaldehyde-fixed, 0.1% Triton X-100 permeabilized C6 (Rat glial tumor cells) cells labeling Aly/Ref with ab202894 at 1/250 dilution, followed by Goat anti-rabbit IgG (Alexa Fluor® 488) (ab150077) secondary antibody at 1/1000 dilution (green). Confocal image showing nuclear and weakly cytoplasmic staining on C6 cell line. The nuclear counter stain is DAPI (blue). Tubulin is detected with ab7291 (anti-Tubulin mouse mAb) at 1/1000 dilution and ab150120 (AlexaFluor®594 Goat anti-Mouse secondary) at 1/1000 dilution (red).

The negative controls are as follows :
-ve control 1 : ab202894 at 1/250 dilution followed by ab150120 (AlexaFluor®594 Goat anti-Mouse secondary) at 1/1000 dilution.
-ve control 2 : ab7291 (anti-Tubulin mouse mAb) at 1/1000 dilution followed by ab150077 (Alexa Fluor®488 Goat Anti-Rabbit IgG H&L) at 1/1000 dilution.

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • IHC-P

Supplier Data

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Immunohistochemical analysis of paraffin-embedded rat liver tissue labeling Aly/Ref with ab202894 at 1/500 dilution, followed by Goat Anti-Rabbit IgG H&L (HRP) (ab97051) secondary antibody at 1/500 dilution. Nuclear and weakly cytoplasmic staining on rat liver tissue is observed. Counter stained with Hematoxylin.

Secondary antibody only control : Used PBS instead of primary antibody, secondary antibody is Goat Anti-Rabbit IgG H&L (HRP) (ab97051) at 1/500 dilution.

Perform heat mediated antigen retrieval with Tris/EDTA buffer pH 9.0 before commencing with IHC staining protocol.

Western blot - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • WB

Supplier Data

Western blot - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Blocking/Dilution buffer : 5% NFDM/TBST.

All lanes:

Western blot - Anti-Aly/Ref antibody [EPR17942] (ab202894) at 1/10000 dilution

Lane 1:

PC-3 (Human prostate cancer cell line) whole cell lysate at 20 µg

Lane 2:

HepG2 (Human liver hepatocellular carcinoma) whole cell lysate at 20 µg

Lane 3:

HeLa (Human epithelial cells from cervix adenocarcinoma) whole cell lysate at 20 µg

Lane 4:

HEK293 (Human epithelial cells from embryonic kidney) whole cell lysate at 20 µg

Secondary

All lanes:

Western blot - Goat Anti-Rabbit IgG H&L (HRP) (<a href='/en-us/products/secondary-antibodies/goat-rabbit-igg-h-l-hrp-ab97051'>ab97051</a>) at 1/1000 dilution

Predicted band size: 27 kDa

Observed band size: 27 kDa

false

Exposure time: 5s

Western blot - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • WB

Supplier Data

Western blot - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Blocking/Dilution buffer : 5% NFDM/TBST.

All lanes:

Western blot - Anti-Aly/Ref antibody [EPR17942] (ab202894) at 1/2000 dilution

Lane 1:

Human fetal brain lysate at 10 µg

Lane 2:

Human fetal heart lysate at 10 µg

Lane 3:

Human fetal kidney lysate at 10 µg

Secondary

All lanes:

Anti-Rabbit IgG (HRP), specific to the non-reduced form of IgG at 1/1000 dilution

Predicted band size: 27 kDa

Observed band size: 27 kDa

false

Exposure time: 15s

Western blot - Anti-Aly/Ref antibody [EPR17942] (AB202894)
  • WB

Supplier Data

Western blot - Anti-Aly/Ref antibody [EPR17942] (AB202894)

Blocking/Dilution buffer : 5% NFDM/TBST.

All lanes:

Western blot - Anti-Aly/Ref antibody [EPR17942] (ab202894) at 1/2000 dilution

Lane 1:

Mouse brain lysate at 10 µg

Lane 2:

Mouse heart lysate at 10 µg

Lane 3:

Rat brain lysate at 10 µg

Lane 4:

Rat heart lysate at 10 µg

Secondary

All lanes:

Western blot - Goat Anti-Rabbit IgG H&L (HRP) (<a href='/en-us/products/secondary-antibodies/goat-rabbit-igg-h-l-hrp-ab97051'>ab97051</a>) at 1/1000 dilution

Predicted band size: 27 kDa

Observed band size: 27 kDa

false

Exposure time: 15s

  • Carrier free

    Anti-Aly/Ref antibody [EPR17942] - BSA and Azide free

  • 660 APC

    APC Anti-Aly/Ref antibody [EPR17942]

  • 519 Alexa Fluor® 488

    Alexa Fluor® 488 Anti-Aly antibody [EPR17942]

  • 565 Alexa Fluor® 555

    Alexa Fluor® 555 Anti-Aly antibody [EPR17942]

  • 603 Alexa Fluor® 568

    Alexa Fluor® 568 Anti-Aly antibody [EPR17942]

  • 617 Alexa Fluor® 594

    Alexa Fluor® 594 Anti-Aly antibody [EPR17942]

  • 665 Alexa Fluor® 647

    Alexa Fluor® 647 Anti-Aly antibody [EPR17942]

  • 775 Alexa Fluor® 750

    Alexa Fluor® 750 Anti-Aly/Ref antibody [EPR17942]

  • HRP

    HRP Anti-Aly/Ref antibody [EPR17942]

  • 578 PE

    PE Anti-Aly/Ref antibody [EPR17942]

Key facts

Host species

Rabbit

Clonality

Monoclonal

Clone number

EPR17942

Isotype

IgG

Carrier free

No

Reacts with

Mouse, Rat, Human

Applications

Flow Cyt (Intra), IHC-P, WB, ICC/IF, IP

applications

Immunogen

The exact immunogen used to generate this antibody is proprietary information.

Reactivity data

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Product details

What is this antibody validated in?
Anti-Aly/Ref antibody [EPR17942] (ab202894) is a rabbit recombinant monoclonal antibody and is validated for use in Western Blot (WB), Flow Cytometry (Intra), Flow Cytometry (Flow Cyt), Immunoprecipitation (IP), Immunohistochemistry (IHC-P), Immunocytochemistry/immunofluorescence (ICC/IF) in Human, Mouse, Rat samples.

What is the molecular weight of Aly/Ref?
Anti-Aly/Ref [EPR17942] (ab202894) specifically detects a band for Aly/Ref (UniProt: Q86V81) at a molecular weight of 27kDa.

Trusted by the scientific community
Anti-Aly/Ref [EPR17942] (ab202894) was first used in a scientific publication in 2015 and has been cited over 10 times in peer-reviewed journals.

Trial sizes available!
Test your antibody or perform pre-screening before committing to a larger quantity. Sold in 10µl. Discover our selection of trial-size antibodies.

Other related products
We have a range of other formats of antibody clone [EPR17942] also available for your convenience: ab202894, Carrier free - ab240364, PE - ab305874, APC - ab305875, HRP - ab305876, Alkaline Phosphatase - ab308738, Alexa Fluor® 488 - ab309694, Alexa Fluor® 647 - ab310060, Alexa Fluor® 594 - ab310452, Alexa Fluor® 555 - ab311981, Alexa Fluor® 568 - ab312456, Alexa Fluor® 750 - ab321354

Patented technology
Our RabMAb® technology is a patented hybridoma-based technology for making rabbit monoclonal antibodies. For details on our patents, please refer to RabMAb® patents.

What are the advantages of a recombinant monoclonal antibody?
This product is a recombinant monoclonal antibody, which offers several advantages including:

  • - High batch-to-batch consistency and reproducibility
  • - Improved sensitivity and specificity
  • - Long-term security of supply
  • - Animal-free batch production

For more information, read more on recombinant antibodies.

Properties and storage information

Form
Liquid
Purification technique
Affinity purification Protein A
Storage buffer
pH: 7.2 - 7.4 Preservative: 0.01% Sodium azide Constituents: PBS, 40% Glycerol (glycerin, glycerine), 0.05% BSA
Shipped at conditions
Blue Ice
Appropriate short-term storage duration
1-2 weeks
Appropriate short-term storage conditions
+4°C
Appropriate long-term storage conditions
-20°C
Aliquoting information
Upon delivery aliquot
Storage information
Avoid freeze / thaw cycle

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

Aly/Ref also known as THOC4 is a protein that plays an important role in mRNA processing and transport. It is a member of the TREX (transcription/export) complex having a molecular mass of approximately 27 kDa. Aly/Ref is primarily expressed in the nucleus where it binds to spliced mRNAs and ensures their export to the cytoplasm. Functionally Aly/Ref interacts with mRNA export adapters attaching to the cap-binding complex at the 5' end of mRNA facilitating its journey to the nuclear pore.
Biological function summary

Aly/Ref functions by forming tight associations with the TREX complex which includes other proteins like UAP56. It is responsible for coupling transcription with mRNA processing and export helping to maintain the integrity of gene expression. Aly/Ref directly influences the efficiency and accuracy of mRNA export impacting gene regulation by ensuring that only fully processed transcripts exit the nucleus. By doing so it helps coordinate the transcription and mRNA export processes.

Pathways

Aly/Ref associates with the mRNA surveillance pathway and the RNA export pathway. Aly/Ref works closely with proteins like EJC components which are involved in checking mRNA quality before export. This participation ensures that only correctly spliced mRNAs move from the nucleus to the cytoplasm where they translate into proteins. Aly/Ref also contributes to maintaining cellular homeostasis by regulating the amount of mRNA available for translation.

Aly/Ref relates to cancer and neurological disorders. Changes in the expression or function of Aly/Ref can disrupt mRNA export leading to abnormal protein synthesis which is associated with cancer development. Furthermore Aly/Ref interacts with proteins such as NXF1 which are implicated in the onset of certain neurological disorders when mutated or misregulated revealing its broader impact on cellular health and disease progression.

Product protocols

For this product, it's our understanding that no specific protocols are required. You can visit:

Target data

Functions as an mRNA export adapter; component of the transcription/export (TREX) complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA (PubMed : 15833825, PubMed : 15998806, PubMed : 17190602). TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NXF1 pathway (PubMed : 15833825, PubMed : 15998806, PubMed : 17190602). Involved in the nuclear export of intronless mRNA; proposed to be recruited to intronless mRNA by ATP-bound DDX39B (PubMed : 17984224). Plays a key role in mRNP recognition and mRNA packaging by bridging the mRNP-bound EJC and the TREX core complex (PubMed : 37020021). TREX recruitment occurs via an interaction between ALYREF/THOC4 and the cap-binding protein NCBP1 (PubMed : 15833825, PubMed : 15998806, PubMed : 17190602, PubMed : 37020021). Required for TREX complex assembly and for linking DDX39B to the cap-binding complex (CBC) (PubMed : 15998806, PubMed : 17984224, PubMed : 37020021). Binds mRNA which is thought to be transferred to the NXF1-NXT1 heterodimer for export (TAP/NXF1 pathway) (PubMed : 11675789, PubMed : 11707413, PubMed : 11979277, PubMed : 15833825, PubMed : 15998806, PubMed : 17190602, PubMed : 18364396, PubMed : 22144908, PubMed : 22893130, PubMed : 23222130, PubMed : 25662211). In conjunction with THOC5 functions in NXF1-NXT1 mediated nuclear export of HSP70 mRNA; both proteins enhance the RNA binding activity of NXF1 and are required for NXF1 localization to the nuclear rim (PubMed : 19165146). Involved in mRNA export of C5-methylcytosine (m5C)-containing mRNAs : specifically recognizes and binds m5C mRNAs and mediates their nucleo-cytoplasmic shuttling (PubMed : 28418038). Acts as a chaperone and promotes the dimerization of transcription factors containing basic leucine zipper (bZIP) domains and thereby promotes transcriptional activation (PubMed : 10488337). Involved in transcription elongation and genome stability (PubMed : 12438613).. (Microbial infection) The TREX complex is essential for the export of Kaposi's sarcoma-associated herpesvirus (KSHV) intronless mRNAs and infectious virus production; ALYREF/THOC4 mediates the recruitment of the TREX complex to the intronless viral mRNA.
See full target information ALYREF

Publications (18)

Recent publications for all applications. Explore the full list and refine your search

Clinics (Sao Paulo, Brazil) 80:100697 PubMed40466438

2025

CircHIPK3's dual role in promoting angiogenesis and inhibiting apoptosis through FASN mRNA stabilization in gallbladder cancer.

Applications

Unspecified application

Species

Unspecified reactive species

ZhenWei Li,HaiJiu Wang,Cheng Wang,ZhiXin Wang,Zhi Xie,JinMing Liu

Scientific reports 15:1351 PubMed39779775

2025

RNA binding protein ALYREF regulates ferroptosis to facilitate LUAD growth and metastasis via promoting SLC7A11 mRNA stability.

Applications

Unspecified application

Species

Unspecified reactive species

Yanni Chen,Ting Zhao,Hao Chen,Jun Chen,Weili Han

The Journal of biological chemistry 300:107996 PubMed39547511

2024

The molecular chaperone ALYREF promotes R-loop resolution and maintains genome stability.

Applications

Unspecified application

Species

Unspecified reactive species

Jay Bhandari,Cristina Guillén-Mendoza,Kathryn Banks,Lillian Eliaz,Sierra Southwell,Darriel Eyaa,Rosa Luna,Andrés Aguilera,Xiaoyu Xue

NPJ precision oncology 8:243 PubMed39455812

2024

ALYREF recruits ELAVL1 to promote colorectal tumorigenesis via facilitating RNA m5C recognition and nuclear export.

Applications

Unspecified application

Species

Unspecified reactive species

Longhua Zhong,Jingxun Wu,Bingqian Zhou,Jiapeng Kang,Xicheng Wang,Feng Ye,Xiaoting Lin

The EMBO journal 43:6001-6031 PubMed39424953

2024

The mitochondrial long non-coding RNA lncMtloop regulates mitochondrial transcription and suppresses Alzheimer's disease.

Applications

Unspecified application

Species

Unspecified reactive species

Wandi Xiong,Kaiyu Xu,Jacquelyne Ka-Li Sun,Siling Liu,Baizhen Zhao,Jie Shi,Karl Herrup,Hei-Man Chow,Lin Lu,Jiali Li

International journal of biological sciences 20:331-346 PubMed38164181

2024

ALYREF-mediated RNA 5-Methylcytosine modification Promotes Hepatocellular Carcinoma Progression Via Stabilizing EGFR mRNA and pSTAT3 activation.

Applications

Unspecified application

Species

Unspecified reactive species

Jiayida Nulali,Kaiwen Zhang,Manmei Long,Yueyue Wan,Yu Liu,Qianyue Zhang,Liu Yang,Jun Hao,Linhua Yang,Huaidong Song

Clinical and translational medicine 13:e1273 PubMed37228185

2023

NSUN2-mediated m C RNA methylation dictates retinoblastoma progression through promoting PFAS mRNA stability and expression.

Applications

Unspecified application

Species

Unspecified reactive species

Sipeng Zuo,Lin Li,Xuyang Wen,Xiang Gu,Ai Zhuang,Rui Li,Fuxiang Ye,Shengfang Ge,Xianqun Fan,Jiayan Fan,Peiwei Chai,Linna Lu

Nature communications 13:7904 PubMed36550132

2022

Exon junction complex shapes the mA epitranscriptome.

Applications

Unspecified application

Species

Unspecified reactive species

Xin Yang,Robinson Triboulet,Qi Liu,Erdem Sendinc,Richard I Gregory

Cancer gene therapy 30:149-162 PubMed36123390

2022

YAP 5-methylcytosine modification increases its mRNA stability and promotes the transcription of exosome secretion-related genes in lung adenocarcinoma.

Applications

Unspecified application

Species

Unspecified reactive species

Wenjun Yu,Congcong Zhang,Yikun Wang,Xiaoting Tian,Yayou Miao,Fanyu Meng,Lifang Ma,Xiao Zhang,Jinjing Xia

Cell death & disease 13:124 PubMed35136031

2022

Pharmacological inhibition of Ref-1 enhances the therapeutic sensitivity of papillary thyroid carcinoma to vemurafenib.

Applications

Unspecified application

Species

Unspecified reactive species

Linfei Hu,Jun Zhang,Mengran Tian,Ning Kang,Guangwei Xu,Jingtai Zhi,Xianhui Ruan,Xiukun Hou,Wei Zhang,Jiaoyu Yi,Weike Ma,Luchen Chang,Tao Tang,Xiangqian Zheng,Xi Wei,Ming Gao
View all publications

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