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AB195411

Anti-CBFb antibody - ChIP Grade

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(3 Publications)

Rabbit Polyclonal CBFb antibody. Suitable for ChIP, ChIP-seq and reacts with Human samples. Cited in 3 publications. Immunogen corresponding to Synthetic Peptide within Human CBFB conjugated to Keyhole Limpet Haemocyanin.

View Alternative Names

Core-binding factor subunit beta, CBF-beta, Polyomavirus enhancer-binding protein 2 beta subunit, SL3-3 enhancer factor 1 subunit beta, SL3/AKV core-binding factor beta subunit, PEA2-beta, PEBP2-beta, CBFB

2 Images
ChIP - Anti-CBFb antibody - ChIP Grade (AB195411)
  • ChIP

Supplier Data

ChIP - Anti-CBFb antibody - ChIP Grade (AB195411)

ChIP results obtained with ab195411 directed against CBFb

ChIP assays were performed using SKNO-1 cells, ab195411 and optimized primer pairs for qPCR. Sheared chromatin from 1.25 million cells and 4 μl of antibody were used per ChIP experiment. QPCR was performed using primers specific for the FUT7, OGG1, NFE2, and SPI1 genes. Figure shows the relative occupancy, calculated as the ratio + control/background for which the MYOG gene was used.

ChIP-sequencing - Anti-CBFb antibody - ChIP Grade (AB195411)
  • ChIP-seq

Supplier Data

ChIP-sequencing - Anti-CBFb antibody - ChIP Grade (AB195411)

ChIP assays were performed using SKNO-1 cells, ab195411 and optimized primer pairs for qPCR. Sheared chromatin from 1.25 million cells and 4 μl of antibody were used per ChIP experiment. The IP'd DNA from 6 ChIP's was pooled and analysed with an Illumina Genome Analyzer. Library preparation, cluster generation and sequencing were performed according to the manufacturer's instructions. The 32 bp tags were aligned to the human reference genome (hg18) using the ELAND algorithm. This figure shows the results of the complete chromosome 3 and three genomic regions region surrounding the OGG1, FUT7 and NFE2 genes, respectively. The position of the PCR amplicon is indicated with an arrow.

Key facts

Host species

Rabbit

Clonality

Polyclonal

Isotype

IgG

Carrier free

No

Reacts with

Human

Applications

ChIP, ChIP-seq

applications

Immunogen

The exact immunogen used to generate this antibody is proprietary information.

Synthetic Peptide within Human CBFB conjugated to Keyhole Limpet Haemocyanin. Database link Q13951

Reactivity data

{ "title": "Reactivity Data", "filters": { "stats": ["", "Species", "Dilution Info", "Notes"], "tabs": { "all-applications": {"fullname" : "All Applications", "shortname": "All Applications"}, "ChIP" : {"fullname" : "ChIP", "shortname":"ChIP"}, "ChIPseq" : {"fullname" : "ChIP-sequencing", "shortname":"ChIP-seq"} }, "product-promise": { "all": "all", "testedAndGuaranteed": "tested", "guaranteed": "expected", "predicted": "predicted", "notRecommended": "not-recommended" } }, "values": { "Human": { "ChIP-species-checked": "testedAndGuaranteed", "ChIP-species-dilution-info": "", "ChIP-species-notes": "<p>Use 4 μl per sheared chromatin from 1.25 million cells.</p>", "ChIPseq-species-checked": "testedAndGuaranteed", "ChIPseq-species-dilution-info": "", "ChIPseq-species-notes": "<p></p>" } } }

Properties and storage information

Form
Liquid
Purity
Whole antiserum
Storage buffer
Preservative: 0.05% Sodium azide
Shipped at conditions
Blue Ice
Appropriate short-term storage duration
1-2 weeks
Appropriate short-term storage conditions
+4°C
Appropriate long-term storage conditions
-20°C
Aliquoting information
Upon delivery aliquot
Storage information
Avoid freeze / thaw cycle

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

CBFb also known as Core-Binding Factor Subunit Beta weighs approximately 22 kDa. It plays an important role in gene regulation by stabilizing the DNA binding of core-binding factor alpha (CBFA) subunits such as RUNX proteins. CBFb does not bind DNA directly. Instead it enhances the affinity of the RUNX family for their DNA targets. CBFb is broadly expressed in various tissues with high levels observed in hematopoietic cells.
Biological function summary

CBFb forms a complex with RUNX transcription factors facilitating their function. The complex is essential for hematopoiesis as it regulates the expression of genes critical for blood cell differentiation and proliferation. CBFb is involved in bone development influencing the formation of bone-related genes. This CBFb/RUNX complex plays a role in regulating the cell cycle and apoptosis fundamental processes for maintaining cellular integrity.

Pathways

More than one signaling pathway includes CBFb's involvement. Particularly it participates in the Wnt signaling pathway an important player in cell differentiation. Additionally CBFb/RUNX complex regulates genes downstream in the TGF-beta signaling pathway impacting cellular proliferation and differentiation. Through these pathways CBFb is linked to proteins like SMAD3 further emphasizing its role in mediating various biological processes.

Abnormalities in CBFb function connect to acute myeloid leukemia (AML). CBFb's interaction with RUNX1 can result in a chromosomal translocation that generates the CBFb-MYH11 fusion protein which disrupts normal hematopoiesis and contributes to leukemogenesis. Moreover CBFb variations associate with cleidocranial dysplasia a skeletal disorder through its interaction with the RUNX2 protein highlighting its significance in bone development.

Product protocols

For this product, it's our understanding that no specific protocols are required. You can visit:

Target data

Forms the heterodimeric complex core-binding factor (CBF) with RUNX family proteins (RUNX1, RUNX2, and RUNX3). RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'-TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. The heterodimers bind to the core site of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL3 and GM-CSF promoters. CBF complexes repress ZBTB7B transcription factor during cytotoxic (CD8+) T cell development. They bind to RUNX-binding sequence within the ZBTB7B locus acting as transcriptional silencer and allowing for cytotoxic T cell differentiation.. (Microbial infection) Following infection, hijacked by the HIV-1 Vif protein, leading to the formation a cullin-5-RING E3 ubiquitin-protein ligase complex (ECS complex) that catalyzes ubiquitination and degradation of APOBEC3F and APOBEC3G (PubMed : 22190037, PubMed : 31792451, PubMed : 36598981, PubMed : 36754086, PubMed : 37419875). The complex can also ubiquitinate APOBEC3H to some extent (PubMed : 37640699). Association with HIV-1 Vif protein also inhibits the transcription coactivator activity of CBFB/CBF-beta (PubMed : 22190037).
See full target information CBFB

Publications (3)

Recent publications for all applications. Explore the full list and refine your search

Nature microbiology 10:1447-1462 PubMed40360701

2025

Intragenic viral silencer element regulates HTLV-1 latency via RUNX complex recruitment.

Applications

Unspecified application

Species

Unspecified reactive species

Kenji Sugata,Akhinur Rahman,Koki Niimura,Kazuaki Monde,Takaharu Ueno,Samiul Alam Rajib,Mitsuyoshi Takatori,Wajihah Sakhor,Md Belal Hossain,Sharmin Nahar Sithi,M Ishrat Jahan,Kouki Matsuda,Mitsuharu Ueda,Yoshihisa Yamano,Terumasa Ikeda,Takamasa Ueno,Kiyoto Tsuchiya,Yuetsu Tanaka,Masahito Tokunaga,Kenji Maeda,Atae Utsunomiya,Kazu Okuma,Masahiro Ono,Yorifumi Satou

Cell reports 40:111315 PubMed36070691

2022

Runx2 regulates chromatin accessibility to direct the osteoblast program at neonatal stages.

Applications

Unspecified application

Species

Unspecified reactive species

Hironori Hojo,Taku Saito,Xinjun He,Qiuyu Guo,Shoko Onodera,Toshifumi Azuma,Michinori Koebis,Kazuki Nakao,Atsu Aiba,Masahide Seki,Yutaka Suzuki,Hiroyuki Okada,Sakae Tanaka,Ung-Il Chung,Andrew P McMahon,Shinsuke Ohba

Cell death discovery 8:103 PubMed35256601

2022

LncRNA MEG3 up-regulates SIRT6 by ubiquitinating EZH2 and alleviates nonalcoholic fatty liver disease.

Applications

Unspecified application

Species

Unspecified reactive species

Dongmei Zou,Liang Liu,Yinzhen Zeng,Huanhuan Wang,Dongling Dai,Mingguo Xu
View all publications

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