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AB37477

Anti-CTCF antibody [mAbcam 37477]

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(7 Publications)

Mouse Monoclonal CTCF antibody. Suitable for WB and reacts with Human samples. Cited in 7 publications.

View Alternative Names

Transcriptional repressor CTCF, 11-zinc finger protein, CCCTC-binding factor, CTCFL paralog, CTCF

3 Images
Western blot - Anti-CTCF antibody [mAbcam 37477] (AB37477)
  • WB

Collaborator

Western blot - Anti-CTCF antibody [mAbcam 37477] (AB37477)

ab37477 recognises a band at approximately 130 kDa corresponding to CTCF.

All lanes:

Western blot - Anti-CTCF antibody [mAbcam 37477] (ab37477) at 2 µg/mL

Lane 1:

ZR-75-1 cell extract

Lane 2:

HCT-116 cell extract

Predicted band size: 83 kDa

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This image is courtesy of Elena Klenova, University of Essex, UK

Western blot - Anti-CTCF antibody [mAbcam 37477] (AB37477)
  • WB

Project

Western blot - Anti-CTCF antibody [mAbcam 37477] (AB37477)

All lanes:

Western blot - Anti-CTCF antibody [mAbcam 37477] (ab37477) at 5 µg/mL

Lane 1:

MCF7 (Human breast adenocarcinoma cell line) Whole Cell Lysate at 20 µg

Lane 2:

HeLa (Human epithelial carcinoma cell line) Whole Cell Lysate at 20 µg

Secondary

All lanes:

Western blot - Goat Anti-Mouse IgG H&L (HRP) preadsorbed (<a href='/en-us/products/secondary-antibodies/goat-mouse-igg-h-l-hrp-preadsorbed-ab97040'>ab97040</a>) at 1/5000 dilution

Predicted band size: 83 kDa

true

Exposure time: 90s

Western blot - Anti-CTCF antibody [mAbcam 37477] (AB37477)
  • WB

CiteAb

Western blot - Anti-CTCF antibody [mAbcam 37477] (AB37477)

CTCF western blot using anti-CTCF antibody [mAbcam 37477] ab37477. Publication image and figure legend from Wiechens, N., Singh, V., et al., 2016, PLoS Genet, PubMed 27019336.

ab37477 was used in this publication in western blot. This may not be the same as the application(s) guaranteed by Abcam. For a full list of applications guaranteed by Abcam for ab37477 please see the product overview.

Interdependence of SNF2H and CTCF binding.(A) Chromatin of control cells (red) and CTCF depleted (blue) HeLa cells was immuno-precipitated using an anti-SNF2H antibody and the resulting DNA fragments sequenced. SNF2H is enriched at CTCF sites in comparison to the surrounding DNA, and this enrichment is reduced following depletion of CTCF. (B) ChIP seq experiment for CTCF showing enrichment at CTCF sites (red). Following depletion of SNF2H CTCF occupancy is reduced (blue). (C) Protein levels of SNF2H (green bands) and CTCF (top red bands) in cells depleted for SNF2H, control cells or CTCF depleted cells. Two different quantities (lane 1 and 2) of whole cell extracts of the respective cells were immuno-blotted for SNF2H, CTCF and beta-actin as a loading control. Depletion of SNF2H does not result in any global change in CTCF protein levels.

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Key facts

Host species

Mouse

Clonality

Monoclonal

Clone number

mAbcam 37477

Isotype

IgG1

Light chain type

kappa

Carrier free

No

Reacts with

Human

Applications

WB

applications

Immunogen

The exact immunogen used to generate this antibody is proprietary information.

Specificity

This antibody has previously been successfully used in western blot after immunoprecipitation from mouse NIH3T3 lysates. Please see Yao H et al. Genes Dev 24:2543-55 (2010&#41;, PMID: 20966046 for more details.

Reactivity data

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Product details

CTCF is known to migrate by SDS-PAGE at 130 kDa (PMID: 9016583) We can conjugate this antibody to FITC for you (please see ab150242 for details).

Want a custom formulation?
This antibody clone is manufactured by Abcam. If you require a custom buffer formulation or conjugation for your experiments, please contact orders@abcam.com

Properties and storage information

Form
Liquid
Purity
IgG fraction
Storage buffer
pH: 7.4 Preservative: 0.02% Sodium azide Constituents: PBS
Shipped at conditions
Blue Ice
Appropriate short-term storage duration
1-2 weeks
Appropriate short-term storage conditions
+4°C
Appropriate long-term storage conditions
-20°C
Aliquoting information
Upon delivery aliquot
Storage information
Avoid freeze / thaw cycle

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

CTCF also known as the CCCTC-binding factor is a highly conserved zinc finger protein involved in transcriptional regulation and chromatin organization. It has a molecular weight of approximately 82 kDa. The CTCF protein plays a critical mechanical role in controlling the three-dimensional architecture of the genome by binding to specific DNA sequences and forming chromatin loops. It is widely expressed in various cell types across tissues where it acts as a transcriptional repressor and activator depending on the context. CTCF immunofluorescence techniques enable the visualization of its dynamic distribution and expression within the nucleus.
Biological function summary

The multipurpose CTCF protein acts in coordinating the spatial organization of the genome. It functions as an insulator by regulating the boundaries between different chromosomal domains and controlling gene expression. CTCF operates within various complexes interacting with cohesin a vital protein complex that facilitates loop formation and influences genome architecture. This interaction helps in maintaining the integrity of the genome structure and proper chromatin insulation which are essential for normal gene function.

Pathways

CTCF plays significant roles in epigenetic regulatory networks and transcriptional pathways. In the epigenetic landscape it influences gene expression through modulation of DNA methylation states at CpG islands interacting with proteins like DNA methyltransferases. In transcriptional pathways CTCF interacts with nuclear factor Y (NF-Y) which contributes to cell cycle regulation by modulating the expression of cell cycle genes. These pathways reflect CTCF's versatility in gene regulation and its influence on maintaining cellular homeostasis.

CTCF disruptions have been implicated in cancer and intellectual disabilities. Mutations or altered expression of CTCF can lead to tumorigenesis as CTCF acts as a tumor suppressor by controlling oncogene and tumor suppressor gene expression. In intellectual disabilities CTCF mutations affect brain development by disrupting the expression of neuronal genes. The protein's interaction with cohesin has links to disorders such as Cornelia de Lange syndrome where cohesin complex dysfunction parallels the phenotypes seen with CTCF aberrations.

Product protocols

For this product, it's our understanding that no specific protocols are required. You can visit:

Target data

Chromatin binding factor that binds to DNA sequence specific sites and regulates the 3D structure of chromatin (PubMed : 16949368, PubMed : 18347100, PubMed : 18654629, PubMed : 19322193). Binds together strands of DNA, thus forming chromatin loops, and anchors DNA to cellular structures, such as the nuclear lamina (PubMed : 18347100, PubMed : 18654629, PubMed : 19322193). Defines the boundaries between active and heterochromatic DNA via binding to chromatin insulators, thereby preventing interaction between promoter and nearby enhancers and silencers (PubMed : 18347100, PubMed : 18654629, PubMed : 19322193). Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus (PubMed : 16107875, PubMed : 16815976, PubMed : 17827499). On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2 (By similarity). Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory (By similarity). Regulates asynchronous replication of IGF2/H19 (By similarity). Plays a critical role in gene silencing over considerable distances in the genome (By similarity). Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones (PubMed : 18413740). Inversely, binding to target sites is prevented by CpG methylation (PubMed : 18413740). Plays an important role in chromatin remodeling (PubMed : 18413740). Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping (PubMed : 12191639). Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription (PubMed : 12191639). When bound to chromatin, it provides an anchor point for nucleosomes positioning (PubMed : 12191639). Seems to be essential for homologous X-chromosome pairing (By similarity). May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation (PubMed : 11743158). May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation (PubMed : 11743158). Involved in sister chromatid cohesion (PubMed : 12191639). Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites (PubMed : 18550811). Plays a role in the recruitment of CENPE to the pericentromeric/centromeric regions of the chromosome during mitosis (PubMed : 26321640). Acts as a transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene (PubMed : 18413740, PubMed : 8649389, PubMed : 9591631). Also binds to the PLK and PIM1 promoters (PubMed : 12191639). Acts as a transcriptional activator of APP (PubMed : 9407128). Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression (PubMed : 18347100, PubMed : 19322193). Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription (By similarity). Seems to act as tumor suppressor (PubMed : 12191639).
See full target information CTCF

Publications (7)

Recent publications for all applications. Explore the full list and refine your search

Nature communications 13:204 PubMed35017527

2022

Canonical WNT signaling-dependent gating of MYC requires a noncanonical CTCF function at a distal binding site.

Applications

Unspecified application

Species

Unspecified reactive species

Ilyas Chachoua,Ilias Tzelepis,Hao Dai,Jia Pei Lim,Anna Lewandowska-Ronnegren,Felipe Beccaria Casagrande,Shuangyang Wu,Johanna Vestlund,Carolina Diettrich Mallet de Lima,Deeksha Bhartiya,Barbara A Scholz,Mirco Martino,Rashid Mehmood,Anita Göndör

Molecules and cells 44:805-829 PubMed34764232

2021

CHD4 Conceals Aberrant CTCF-Binding Sites at TAD Interiors by Regulating Chromatin Accessibility in Mouse Embryonic Stem Cells.

Applications

Unspecified application

Species

Unspecified reactive species

Sungwook Han,Hosuk Lee,Andrew J Lee,Seung-Kyoon Kim,Inkyung Jung,Gou Young Koh,Tae-Kyung Kim,Daeyoup Lee

PLoS genetics 12:e1005940 PubMed27019336

2016

The Chromatin Remodelling Enzymes SNF2H and SNF2L Position Nucleosomes adjacent to CTCF and Other Transcription Factors.

Applications

Unspecified application

Species

Unspecified reactive species

Nicola Wiechens,Vijender Singh,Triantaffyllos Gkikopoulos,Pieta Schofield,Sonia Rocha,Tom Owen-Hughes

The FEBS journal 281:2713-25 PubMed24725430

2014

Vigilin interacts with CCCTC-binding factor (CTCF) and is involved in CTCF-dependent regulation of the imprinted genes Igf2 and H19.

Applications

Unspecified application

Species

Unspecified reactive species

Qiuying Liu,Bo Yang,Xiaoyan Xie,Ling Wei,Wenquan Liu,Wenli Yang,Yajun Ge,Qiang Zhu,Junzhe Zhang,Lei Jiang,Xiaoqin Yu,Wenyan Shen,Ran Li,Xuejiao Shi,Bo Li,Yang Qin

The Journal of biological chemistry 288:26067-77 PubMed23884423

2013

Ribosomal RNA gene transcription mediated by the master genome regulator protein CCCTC-binding factor (CTCF) is negatively regulated by the condensin complex.

Applications

WB

Species

Unspecified reactive species

Kaimeng Huang,Jinping Jia,Changwei Wu,Mingze Yao,Min Li,Jingji Jin,Cizhong Jiang,Yong Cai,Duanqing Pei,Guangjin Pan,Hongjie Yao

Nucleic acids research 40:3378-91 PubMed22210889

2011

Identification of CTCF as a master regulator of the clustered protocadherin genes.

Applications

EMSA

Species

Unspecified reactive species

Michal Golan-Mashiach,Moshe Grunspan,Rafi Emmanuel,Liron Gibbs-Bar,Rivka Dikstein,Ehud Shapiro

Genes & development 24:2543-55 PubMed20966046

2010

Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA.

Applications

IP, WB, WB, IP

Species

Human, Human, Mouse, Mouse

Hongjie Yao,Kevin Brick,Yvonne Evrard,Tiaojiang Xiao,R Daniel Camerini-Otero,Gary Felsenfeld
View all publications

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