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AB157464

Anti-MBD3 antibody [EPR9913] - ChIP Grade

5

(9 Reviews)

|

(24 Publications)

Rabbit Recombinant Monoclonal MBD3 antibody. Suitable for IP, ChIP, WB, ICC/IF, Flow Cyt (Intra) and reacts with Mouse, Rat, Human, Cow samples. Cited in 24 publications.

View Alternative Names

Methyl-CpG-binding domain protein 3, Methyl-CpG-binding protein MBD3, MBD3

7 Images
Immunocytochemistry/ Immunofluorescence - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)
  • ICC/IF

Unknown

Immunocytochemistry/ Immunofluorescence - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)

Immunocytochemistry/Immunofluorescence analysis of HeLa (human cervix adenocarcinoma) labelling MBD3 with purified ab157464 at 1/1000. Cells were fixed with 4% PFA and permeabilized with 0.1% Triton X-100. An Alexa Fluor® 488-conjugated goat anti-rabbit IgG (1/1000) was used as the secondary antibody (ab150077). Nuclei counterstained with DAPI (blue).

Control : PBS only

Immunocytochemistry/ Immunofluorescence - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)
  • ICC/IF

Unknown

Immunocytochemistry/ Immunofluorescence - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)

Immunofluorescent analysis of HeLa cells labeling MBD3 with ab157464 at 1/100 dilution.

Flow Cytometry (Intracellular) - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)
  • Flow Cyt (Intra)

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Flow Cytometry (Intracellular) - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)

Intracellular flow cytometric analysis of permeabilized 293T cells labeling MBD3 with ab157464 at 1/10 dilution (red) compared to a rabbit IgG negative control (green).

ChIP - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)
  • ChIP

Unknown

ChIP - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)

Chromatin was prepared from HeLa cells according to the Abcam Dual X-ChIP protocol*. Cells were fixed with EGS for 30 minutes, then formaldehyde for 10 minutes.
The ChIP was performed with 25 µg of chromatin, 5 µg of ab157464 (red), and 20 µl of Protein A/G sepharose beads. 5 µg of rabbit normal IgG was added to the beads control (gray). The immunoprecipitated DNA was quantified by real time PCR (Sybr green approach).
Primers and probes are located in the first kb of the transcribed region.
*http : //www.abcam.com/resources?keywords=X%20ChIP%20protocol

ChIP - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)
  • ChIP

Unknown

ChIP - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)

Chromatin was prepared from NIH/3T3 cells according to the Abcam Dual X-ChIP protocol*. Cells were fixed with EGS for 30 minutes, then formaldehyde for 10 minutes.
The ChIP was performed with 25 µg of chromatin, 5 µg of ab157464 (red), and 20 µl of Protein A/G sepharose beads. 5 µg of rabbit normal IgG was added to the beads control (gray). The immunoprecipitated DNA was quantified by real time PCR (Sybr green approach).
Primers and probes are located in the first kb of the transcribed region.
*http : //www.abcam.com/resources?keywords=X%20ChIP%20protocol

Western blot - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)
  • WB

Lab

Western blot - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)

Lanes 1 - 4 : Merged signal (red and green). Green - ab157464 observed at 33 kDa. Red - loading control, ab8245, observed at 37 kDa.

ab157464 was shown to recognize MBD3 when MBD3 knockout samples were used, along with additional cross-reactive bands. Wild-type and MBD3 knockout samples were subjected to SDS-PAGE. ab157464 and ab8245 (loading control to GAPDH) were diluted 1/1000 and 1/10000 respectively and incubated overnight at 4°C. Blots were developed with Goat anti-Rabbit IgG H&L (IRDye® 800CW) preadsorbed and Goat anti-Mouse IgG H&L (IRDye® 680RD) preadsorbed secondary antibodies at 1/10000 dilution for 1 hour at room temperature before imaging.

All lanes:

Western blot - Anti-MBD3 antibody [EPR9913] - ChIP Grade (ab157464) at 1/1000 dilution

Lanes 1 and 3:

Wild-type HAP1 cell lysate at 20 µg

Lanes 2 and 4:

MBD3 knockout HAP1 cell lysate at 20 µg

Secondary

Lanes 1 - 4:

Goat anti-Rabbit IgG H&L (IRDye® 800CW) preadsorbed at 1/10000 dilution

Lanes 1 - 4:

Goat anti-Mouse IgG H&L (IRDye® 680RD) preadsorbed at 1/10000 dilution

Predicted band size: 33 kDa

Observed band size: 33 kDa

false

Western blot - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)
  • WB

Unknown

Western blot - Anti-MBD3 antibody [EPR9913] - ChIP Grade (AB157464)

All lanes:

Western blot - Anti-MBD3 antibody [EPR9913] - ChIP Grade (ab157464) at 1/1000 dilution

Lane 1:

HeLa cell lysate at 10 µg

Lane 2:

293T cell lysate at 10 µg

Lane 3:

Fetal brain lysate at 10 µg

Lane 4:

Y79 cell lysate at 10 µg

Secondary

All lanes:

HRP labelled goat anti-rabbit at 1/2000 dilution

Predicted band size: 33 kDa

false

Key facts

Host species

Rabbit

Clonality

Monoclonal

Clone number

EPR9913

Isotype

IgG

Carrier free

No

Reacts with

Mouse, Human, Rat, Cow

Applications

ChIP, ICC/IF, WB, Flow Cyt (Intra), IP

applications

Immunogen

The exact immunogen used to generate this antibody is proprietary information.

Reactivity data

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Product details

Patented technology
Our RabMAb® technology is a patented hybridoma-based technology for making rabbit monoclonal antibodies. For details on our patents, please refer to RabMAb® patents.

What are the advantages of a recombinant monoclonal antibody?
This product is a recombinant monoclonal antibody, which offers several advantages including:

  • - High batch-to-batch consistency and reproducibility
  • - Improved sensitivity and specificity
  • - Long-term security of supply
  • - Animal-free batch production

For more information, read more on recombinant antibodies.

Properties and storage information

Form
Liquid
Purity
Tissue culture supernatant
Storage buffer
pH: 7.2 - 7.4 Preservative: 0.01% Sodium azide Constituents: PBS, 50% Tissue culture supernatant, 40% Glycerol (glycerin, glycerine), 0.05% BSA
Shipped at conditions
Blue Ice
Appropriate short-term storage conditions
+4°C
Appropriate long-term storage conditions
-20°C

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

The MBD3 protein also known as Methyl-CpG-binding domain protein 3 functions mechanically by binding to methylated DNA which is an essential step in regulating gene expression. It has a molecular mass of approximately 32 kDa. MBD3 is ubiquitously expressed in various tissues demonstrating its role in fundamental cellular processes. The protein does not function alone and often interacts with other proteins as part of gene repression mechanisms.
Biological function summary

The activity of MBD3 impacts chromatin remodeling and gene expression regulation. MBD3 operates as a core component of the nucleosome remodeling deacetylase (NuRD) complex a multi-protein assembly important for transcriptional repression and chromatin structure modification. Its interaction within this complex helps modulate gene expression by altering the accessibility of chromatin and recruiting other modifiers for further regulation.

Pathways

MBD3 plays a significant role in key signaling and epigenetic pathways. It engages in pathways related to chromatin modification and transcription regulation. Its role in the NuRD complex underlines its participation in transcriptional regulation pathways impacting proteins such as HDAC1 and GATA2 which contribute to modifying histone acetylation and influencing gene transcription processes.

Changes in MBD3 expression or function have links to cancer and neurodevelopmental disorders. MBD3 dysregulation associates with tumorigenesis due to its role in maintaining proper gene silencing and expression. Additionally impairment in MBD3 function can relate to intellectual disabilities and developmental delays potentially due to its interaction with epigenetic regulators like MeCP2.

Product protocols

For this product, it's our understanding that no specific protocols are required. You can visit:

Target data

Acts as a component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin (PubMed : 12124384, PubMed : 16428440, PubMed : 28977666). Acts as transcriptional repressor and plays a role in gene silencing (PubMed : 10947852, PubMed : 18644863). Does not bind to methylated DNA by itself (PubMed : 12124384, PubMed : 16428440). Binds to a lesser degree DNA containing unmethylated CpG dinucleotides (PubMed : 24307175). Recruits histone deacetylases and DNA methyltransferases.
See full target information MBD3

Publications (24)

Recent publications for all applications. Explore the full list and refine your search

Nucleic acids research 53: PubMed39876710

2025

c-JUN: a chromatin repressor that limits mesoderm differentiation in human pluripotent stem cells.

Applications

Unspecified application

Species

Unspecified reactive species

Ran Zhang,Guihuan Li,Qi Zhang,Zhenhua Wang,Dan Xiang,Xiaofei Zhang,Jiekai Chen,Andrew P Hutchins,Dajiang Qin,Huanxing Su,Duanqing Pei,Dongwei Li

The EMBO journal 43:2453-2485 PubMed38719994

2024

The GATAD2B-NuRD complex drives DNA:RNA hybrid-dependent chromatin boundary formation upon DNA damage.

Applications

Unspecified application

Species

Unspecified reactive species

Zhichao Liu,Kamal Ajit,Yupei Wu,Wei-Guo Zhu,Monika Gullerova

Nature communications 14:3848 PubMed37385984

2023

Dissecting the roles of MBD2 isoforms and domains in regulating NuRD complex function during cellular differentiation.

Applications

Unspecified application

Species

Unspecified reactive species

Nina Schmolka,Ino D Karemaker,Richard Cardoso da Silva,Davide C Recchia,Vincent Spegg,Jahnavi Bhaskaran,Michael Teske,Nathalie P de Wagenaar,Matthias Altmeyer,Tuncay Baubec

Nature communications 14:1810 PubMed37002234

2023

TRABID overexpression enables synthetic lethality to PARP inhibitor via prolonging 53BP1 retention at double-strand breaks.

Applications

Unspecified application

Species

Unspecified reactive species

Jian Ma,Yingke Zhou,Penglin Pan,Haixin Yu,Zixi Wang,Lei Lily Li,Bing Wang,Yuqian Yan,Yunqian Pan,Qi Ye,Tianjie Liu,Xiaoyu Feng,Shan Xu,Ke Wang,Xinyang Wang,Yanlin Jian,Bohan Ma,Yizeng Fan,Yang Gao,Haojie Huang,Lei Li

BMC biology 20:294 PubMed36575438

2022

SMYD3 associates with the NuRD (MTA1/2) complex to regulate transcription and promote proliferation and invasiveness in hepatocellular carcinoma cells.

Applications

Unspecified application

Species

Unspecified reactive species

Yang Yang,Rongfang Qiu,Siyu Zhao,Lin Shen,Bufu Tang,Qiaoyou Weng,Ziwei Xu,Liyun Zheng,Weiqian Chen,Gaofeng Shu,Yajie Wang,Zhongwei Zhao,Minjiang Chen,Jiansong Ji

Frontiers in cardiovascular medicine 9:1053697 PubMed36620624

2022

5mC modification patterns provide novel direction for early acute myocardial infarction detection and personalized therapy.

Applications

Unspecified application

Species

Unspecified reactive species

Yiqun Guo,Hua Jiang,Jinlong Wang,Ping Li,Xiaoquan Zeng,Tao Zhang,Jianyi Feng,Ruqiong Nie,Yulong Liu,Xiaobian Dong,Qingsong Hu

Nature communications 13:6133 PubMed36253406

2022

An intrinsic temporal order of c-JUN N-terminal phosphorylation regulates its activity by orchestrating co-factor recruitment.

Applications

Unspecified application

Species

Unspecified reactive species

Christopher A Waudby,Saul Alvarez-Teijeiro,E Josue Ruiz,Simon Suppinger,Nikos Pinotsis,Paul R Brown,Axel Behrens,John Christodoulou,Anastasia Mylona

Nature communications 12:447 PubMed33469018

2021

Choroid plexus NKCC1 mediates cerebrospinal fluid clearance during mouse early postnatal development.

Applications

Unspecified application

Species

Unspecified reactive species

Huixin Xu,Ryann M Fame,Cameron Sadegh,Jason Sutin,Christopher Naranjo, Della Syau,Jin Cui,Frederick B Shipley,Amanda Vernon,Fan Gao,Yong Zhang,Michael J Holtzman,Myriam Heiman,Benjamin C Warf,Pei-Yi Lin,Maria K Lehtinen

Cell reports 33:108450 PubMed33264611

2020

The Nucleosome Remodeling and Deacetylase Complex Has an Asymmetric, Dynamic, and Modular Architecture.

Applications

Unspecified application

Species

Unspecified reactive species

Jason K K Low,Ana P G Silva,Mehdi Sharifi Tabar,Mario Torrado,Sarah R Webb,Benjamin L Parker,Maryam Sana,Callum Smits,Jason W Schmidberger,Lou Brillault,Matthew J Jackman,David C Williams,Gerd A Blobel,Sandra B Hake,Nicholas E Shepherd,Michael J Landsberg,Joel P Mackay

Molecular therapy. Methods & clinical development 19:295-306 PubMed33145366

2020

MTA1, a Target of Resveratrol, Promotes Epithelial-Mesenchymal Transition of Endometriosis via ZEB2.

Applications

Unspecified application

Species

Unspecified reactive species

Xiangyi Kong,Xiaofeng Xu,Ling Zhou,Mengjing Zhu,Shuang Yao,Yue Ding,Tao Liu,Yijin Wang,Yan Zhang,Rong Li,Xiaoqiu Tang,Jingxian Ling,Jun Wu,Xianghong Zhu,Yuanyuan Gu,Huaijun Zhou
View all publications

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