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AB54676

Anti-XPD antibody [4G2-2A6]

4

(1 Review)

|

(18 Publications)

Mouse Monoclonal XPD antibody. Suitable for IP, Flow Cyt, WB and reacts with Human samples. Cited in 18 publications. Immunogen corresponding to Recombinant Full Length Protein corresponding to Human ERCC2.

View Alternative Names

XPD, XPDC, ERCC2, General transcription and DNA repair factor IIH helicase subunit XPD, TFIIH subunit XPD, Basic transcription factor 2 80 kDa subunit, CXPD, DNA 5'-3' helicase XPD, DNA excision repair protein ERCC-2, DNA repair protein complementing XP-D cells, TFIIH basal transcription factor complex 80 kDa subunit, Xeroderma pigmentosum group D-complementing protein, BTF2 p80, TFIIH 80 kDa subunit, TFIIH p80

3 Images
Flow Cytometry - Anti-XPD antibody [4G2-2A6] (AB54676)
  • Flow Cyt

Unknown

Flow Cytometry - Anti-XPD antibody [4G2-2A6] (AB54676)

Overlay histogram showing HeLa cells stained with ab54676 (red line). The cells were fixed with 80% methanol (5 min) and then permeabilized with 0.1% PBS-Tween for 20 min. The cells were then incubated in 1x PBS / 10% normal goat serum / 0.3M glycine to block non-specific protein-protein interactions followed by the antibody (ab54676, 1μg/1x106 cells) for 30 min at 22°C. The secondary antibody used was DyLight® 488 goat anti-mouse IgG (H+L) (ab96879) at 1/500 dilution for 30 min at 22°C. Isotype control antibody (black line) was mouse IgG1 [ICIGG1] (ab91353, 2μg/1x106 cells) used under the same conditions. Acquisition of >5,000 events was performed.

This image was generated using the ascites version of the product.

Immunoprecipitation - Anti-XPD antibody [4G2-2A6] (AB54676)
  • IP

Unknown

Immunoprecipitation - Anti-XPD antibody [4G2-2A6] (AB54676)

XPD was immunoprecipitated using 0.5mg Hela whole cell extract, 10μg of Mouse monoclonal to XPD and 50μl of protein G magnetic beads (+). No antibody was added to the control (-).
The antibody was incubated under agitation with Protein G beads for 10min, Hela whole cell extract lysate diluted in RIPA buffer was added to each sample and incubated for a further 10min under agitation.
Proteins were eluted by addition of 40μl SDS loading buffer and incubated for 10min at 70oC; 10μl of each sample was separated on a SDS PAGE gel, transferred to a nitrocellulose membrane, blocked with 5% BSA and probed with ab54676.
Secondary : Goat polyclonal to mouse IgG light chain specific (HRP) at 1/5000 dilution.
Band : 150kDa : SMC1; Non specific - 41 and 42kDa : We are unsure as to the identity of this extra band.

This image was generated using the ascites version of the product.

All lanes:

Immunoprecipitation - Anti-XPD antibody [4G2-2A6] (ab54676)

Predicted band size: 87 kDa

false

Western blot - Anti-XPD antibody [4G2-2A6] (AB54676)
  • WB

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Western blot - Anti-XPD antibody [4G2-2A6] (AB54676)

XPD antibody (ab54676) at 1ug/lane + HeLa cell lysate at 25ug/lane.

This image was generated using the ascites version of the product.

All lanes:

Western blot - Anti-XPD antibody [4G2-2A6] (ab54676)

Predicted band size: 87 kDa

false

Key facts

Host species

Mouse

Clonality

Monoclonal

Clone number

4G2-2A6

Isotype

IgG1

Light chain type

kappa

Carrier free

No

Reacts with

Human

Applications

IP, WB, Flow Cyt

applications

Immunogen

Recombinant Full Length Protein corresponding to Human ERCC2.

P18074

Reactivity data

{ "title": "Reactivity Data", "filters": { "stats": ["", "Species", "Dilution Info", "Notes"], "tabs": { "all-applications": {"fullname" : "All Applications", "shortname": "All Applications"}, "IP" : {"fullname" : "Immunoprecipitation", "shortname":"IP"}, "FlowCyt" : {"fullname" : "Flow Cytometry", "shortname":"Flow Cyt"}, "WB" : {"fullname" : "Western blot", "shortname":"WB"} }, "product-promise": { "all": "all", "testedAndGuaranteed": "tested", "guaranteed": "expected", "predicted": "predicted", "notRecommended": "not-recommended" } }, "values": { "Human": { "IP-species-checked": "testedAndGuaranteed", "IP-species-dilution-info": "", "IP-species-notes": "<p></p>", "FlowCyt-species-checked": "testedAndGuaranteed", "FlowCyt-species-dilution-info": "", "FlowCyt-species-notes": "<p><a href='/en-us/products/primary-antibodies/mouse-igg1-kappa-monoclonal-15-6e10a7-isotype-control-ab170190'>ab170190</a> - Mouse monoclonal IgG1, is suitable for use as an isotype control with this antibody.</p>", "WB-species-checked": "testedAndGuaranteed", "WB-species-dilution-info": "", "WB-species-notes": "<p></p>" } } }

Product details

This product was changed from ascites to tissue culture supernatant on 30th April 2019. Please note that the dilutions may need to be adjusted accordingly. If you have any questions, please do not hesitate to contact our scientific support team.

Properties and storage information

Form
Liquid
Purity
Tissue culture supernatant
Purification notes
Purified from TCS.
Storage buffer
pH: 7.4
Shipped at conditions
Blue Ice
Appropriate short-term storage conditions
+4°C
Appropriate long-term storage conditions
-20°C
Aliquoting information
Upon delivery aliquot
Storage information
Avoid freeze / thaw cycle

Supplementary information

This supplementary information is collated from multiple sources and compiled automatically.

XPD also known as ERCC2 is an essential helicase enzyme belonging to the family of ATP-dependent DNA helicases. It consists of approximately 761 amino acids and has a mass of around 87 kDa. XPD functions mechanically by unwinding double-stranded DNA which is important for various DNA repair processes. This protein is expressed ubiquitously in human tissues highlighting its critical role in maintaining genomic integrity.
Biological function summary

XPD catalyzes the unwinding of DNA within the transcription factor IIH (TFIIH) complex. This complex facilitates DNA repair and transcription initiation. XPD participates in the nucleotide excision repair (NER) pathway where it contributes to repairing damaged DNA by excising damaged nucleotides. Its role in transcription-coupled repair and general transcription initiation underlines its importance in cellular homeostasis.

Pathways

DNA repair and general transcription processes are significantly affected by XPD. It plays an integral role in nucleotide excision repair (NER) and transcription. Within these pathways XPD works closely with other proteins such as XPA which assists in damage verification and incision near DNA lesions. XPD's unwinding function is essential for the correct orientation of DNA during transcription and repair events ensuring accurate gene expression and stability.

XPD mutations link to xeroderma pigmentosum (XP) and trichothiodystrophy (TTD). These conditions often result in increased sensitivity to ultraviolet (UV) radiation and various developmental abnormalities. XPD mutations impair the repair of UV-induced DNA damage causing symptoms in both XP and TTD. XPD also connects with ERCC1 a protein important for repair synthesis and DNA incision highlighting its broad impact on human health when its function is compromised.

Product protocols

For this product, it's our understanding that no specific protocols are required. You can visit:

Target data

ATP-dependent 5'-3' DNA helicase (PubMed : 31253769, PubMed : 8413672, PubMed : 9771713). Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, not absolutely essential for minimal transcription in vitro (PubMed : 10024882, PubMed : 17466626, PubMed : 9771713). Required for transcription-coupled nucleotide excision repair (NER) of damaged DNA; recognizes damaged bases (PubMed : 17466626, PubMed : 23352696, PubMed : 9771713). Sequestered in chromatin on UV-damaged DNA (PubMed : 23352696). When complexed to CDK-activating kinase (CAK), involved in transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The ATP-dependent helicase activity of XPD/ERCC2 is required for DNA opening. Involved in DNA lesion verification (PubMed : 31253769). In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription. XPD/ERCC2 acts by forming a bridge between CAK and the core-TFIIH complex. The structure of the TFIIH transcription complex differs from the NER-TFIIH complex; large movements by XPD/ERCC2 and XPB/ERCC3 are stabilized by XPA which allow this subunit to contact ssDNA (PubMed : 31253769, PubMed : 33902107). Involved in the regulation of vitamin-D receptor activity. As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation. Might have a role in aging process and could play a causative role in the generation of skin cancers.
See full target information ERCC2

Publications (18)

Recent publications for all applications. Explore the full list and refine your search

The Journal of biological chemistry 298:102433 PubMed36041630

2022

Systematic mutagenesis of TFIIH subunit p52/Tfb2 identifies residues required for XPB/Ssl2 subunit function and genetic interactions with TFB6.

Applications

Unspecified application

Species

Unspecified reactive species

Jacob Bassett,Jenna K Rimel,Shrabani Basu,Pratik Basnet,Jie Luo,Krysta L Engel,Michael Nagel,Alexander Woyciehowsky,Christopher C Ebmeier,Craig D Kaplan,Dylan J Taatjes,Jeffrey A Ranish

Cell transplantation 31:9636897221092778 PubMed35536165

2022

XPA Enhances Temozolomide Resistance of Glioblastoma Cells by Promoting Nucleotide Excision Repair.

Applications

Unspecified application

Species

Unspecified reactive species

Weimin Dai,An Wu,Yunping Li,Guofeng Yu,Xinjiang Yan

Molecular cell 82:1343-1358.e8 PubMed35271816

2022

Active DNA damage eviction by HLTF stimulates nucleotide excision repair.

Applications

Unspecified application

Species

Unspecified reactive species

Marvin van Toorn,Yasemin Turkyilmaz,Sueji Han,Di Zhou,Hyun-Suk Kim,Irene Salas-Armenteros,Mihyun Kim,Masaki Akita,Franziska Wienholz,Anja Raams,Eunjin Ryu,Sukhyun Kang,Arjan F Theil,Karel Bezstarosti,Maria Tresini,Giuseppina Giglia-Mari,Jeroen A Demmers,Orlando D Schärer,Jun-Hyuk Choi,Wim Vermeulen,Jurgen A Marteijn

International journal of molecular medicine 46:201-210 PubMed32377720

2020

XPD inhibits cell growth and invasion and enhances chemosensitivity in esophageal squamous cell carcinoma by regulating the PI3K/AKT signaling pathway.

Applications

Unspecified application

Species

Unspecified reactive species

Jie Jian,Shuang Li,Li-Zhen Liu,Li Zhen,Ling Yao,Li-Hong Gan,Ya-Qing Huang,Nian Fang

Haematologica 104:1756-1767 PubMed30765471

2019

Dimeric ferrochelatase bridges ABCB7 and ABCB10 homodimers in an architecturally defined molecular complex required for heme biosynthesis.

Applications

Unspecified application

Species

Unspecified reactive species

Nunziata Maio,Ki Soon Kim,Gregory Holmes-Hampton,Anamika Singh,Tracey A Rouault

Nucleic acids research 46:9563-9577 PubMed30165384

2018

Repair protein persistence at DNA lesions characterizes XPF defect with Cockayne syndrome features.

Applications

Unspecified application

Species

Unspecified reactive species

Mariangela Sabatella,Arjan F Theil,Cristina Ribeiro-Silva,Jana Slyskova,Karen Thijssen,Chantal Voskamp,Hannes Lans,Wim Vermeulen

Human molecular genetics 27:837-852 PubMed29309586

2018

Cytosolic HSC20 integrates de novo iron-sulfur cluster biogenesis with the CIAO1-mediated transfer to recipients.

Applications

Unspecified application

Species

Unspecified reactive species

Ki Soon Kim,Nunziata Maio,Anamika Singh,Tracey A Rouault

Cell reports 18:1434-1443 PubMed28178521

2017

The CIA Targeting Complex Is Highly Regulated and Provides Two Distinct Binding Sites for Client Iron-Sulfur Proteins.

Applications

Unspecified application

Species

Unspecified reactive species

Diana C Odermatt,Kerstin Gari

Genetics 205:139-153 PubMed28049704

2017

The Nucleotide Excision Repair Pathway Limits L1 Retrotransposition.

Applications

Unspecified application

Species

Unspecified reactive species

Geraldine Servant,Vincent A Streva,Rebecca S Derbes,Madushani I Wijetunge,Marc Neeland,Travis B White,Victoria P Belancio,Astrid M Roy-Engel,Prescott L Deininger

Journal of virology 90:10972-10980 PubMed27681137

2016

Specific Inhibition of HIV Infection by the Action of Spironolactone in T Cells.

Applications

Unspecified application

Species

Unspecified reactive species

Benoît Lacombe,Marina Morel,Florence Margottin-Goguet,Bertha Cecilia Ramirez
View all publications

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