How to choose the best mitochondrial assay for your experiments

Every year an appreciable percentage of pharmaceutical drugs are withdrawn from the market due to adverse effects not discovered during preclinical and clinical testing.

Toxicity of drug compounds can lead to mitochondrial damage and dysfunction which have been associated with the pathology of many common diseases.

Mitochondrial assays are an essential part of the drug discovery process, saving time and money by preventing attrition in later clinical studies.

Our assays for assessing mitochondrial toxicity provide a complete solution for all stages of in vitro mitochondrial safety analysis and measurement of key parameters of mitochondrial function. We’ve put this guide together to demystify the selection process and help you find the right assay for your experiments.

What do you need to consider when choosing a mitochondrial assay?

You can first screen mitochondrial health with our ranges of biogenesis and membrane potential assays. If these pick up adverse indicators, you can use our oxidative phosphorylation (OXPHOS) assays to investigate energy impairment and discover what’s going on in greater detail.

Our assays can help you look at:

How do I measure mitochondrial biogenesis?

Mitochondrial biogenesis assays measure the rate at which cells generate new mitochondria, providing a measure of mitochondrial health.

How our mitochondrial biogenesis assays can help

Our assays measure biogenesis by measuring the ratio of mitochondria and nuclear-encoded proteins, making them the ideal tool to uncover chronic effects of mitochondrial DNA replication and protein synthesis. Our MitoBiogenesis™ kits come with everything you need to run your assay, including pre-measured dyes and buffers.

Product
Readout

MitoBiogenesis In-Cell ELISA

ELISA (IRDyes®, colorimetric, or fluorometric)
Mitobiogenesis Western Blot Cocktail (ab123545)
Western blot

How do I measure mitochondrial membrane potential ?

Mitochondrial membrane potential is a key indicator of mitochondrial activity levels. Our wide range of assay kits enables you to measure membrane potential whatever your application.

How membrane potential assays can help

A number of fluorescent dyes are available that accumulate in mitochondria due to their membrane potential. Our wide range of assay kits can help you measure membrane potential in the majority of applications.

Product name
Applications
JC-1 Mitochondrial Membrane Potential Assay Kit (ab113850)
Live adherent or suspension cells, microplate reader

JC-10 Mitochondrial Membrane Potential Assay Kit

Flow cytometry (ab112133)

Microplate reader (ab112134)

Live adherent or suspension cells, microplate reader or flow cytometry
TMRE Mitochondrial Membrane Potential Assay Kit (ab113852)
Live adherent or suspension cells, flow cytometry, microplate and fluorescent microscopy

How do I investigate energy impairment?

Changes to oxygen consumption or membrane potential may indicate energy impairment upon drug treatment. To identify the exact cause of energy impairment, activity of metabolic enzymes- including oxidative phosphorylation complexes and enzymes involved in wider mitochondrial metabolic pathways like the TCA cycle- should be assessed.

How our OXPHOS assays can help

To investigate the in vitro activity of individual oxidative phosphorylation (OXPHOS) enzyme complexes, we use immunocapture to enable specific biochemical assays for each complex.

Our in vitro MitoTox assays measure the effect of drug treatment on oxidative phosphorylation complex activity in a colorimetric microplate format that can be easily adapted for high-throughput assessment. The assays can be used to test IC50 of two compounds in a dose-response format, and up to 23 compounds at a single concentration. MitoTox assays are available for each of the OXPHOS complexes.

Product
Sample type
ALDH2 Activity Assay Kit (ab115348)
Cell extracts, tissue extracts
Citrate Synthase Activity Assay Kit (ab119692)
Cell extracts, tissue extracts
Complex I Enzyme Activity Assay Kit (ab109721)
Mitochondria, cell extracts, tissue extracts
Complex II Enzyme Activity Assay Kit (ab109908)
Mitochondria, cell extracts, tissue extracts
Complex IV Human Enzyme Activity Assay Kit (ab109909)
Mitochondria, cell extracts, tissue extracts
Complex IV Rodent Enzyme Activity Assay Kit (ab109911)
Mitochondria, cell extracts, tissue extracts
Complex V (ATP synthase) Activity Assay Kit (ab109714)
Mitochondria, cell extracts, tissue extracts
ENO1 Activity Assay Kit (ab117994)
Cell extracts, tissue extracts
Fumarase Specific Activity Assay Kit (ab110043)
Cell extracts, tissue extracts
LDH-B Activity Assay Kit (ab140361)
Cell extracts, tissue extracts
MDH2 Activity Assay Kit (ab119693)
Cell extracts, tissue extracts
MAOB Specific Activity Assay Kit (ab109912)
Cell extracts
PDH Enzyme Activity Assay Kit (ab109902)
Cell extracts, tissue extracts
Human Transketolase ELISA Kit (ab187398)
Cell culture extracts, tissue extracts
MitoTox™ Complex I OXPHOS Activity Assay (ab109903)
Inhibitor compounds
MitoTox Complex II OXPHOS Activity Assay (ab109904)
Inhibitor compounds
MitoTox Complex II + III OXPHOS Activity Assay (ab109905)
Inhibitor compounds
MitoTox Complex IV OXPHOS Activity Assay (ab109906)
Inhibitor compounds
MitoTox Complex V OXPHOS Activity Assay (ab109907)
Inhibitor compounds

When should I quantify oxidative stress?

A thorough investigation of oxidative stress should be conducted where initial screens show increased ROS production to identify its exact cause.

How our assays can help

We’ve developed effective tools to measure ROS production by direct ROS measurement, quantification of ROS-induced protein modifications, and measurement of antioxidant capacity. Many of our kits are available in 384-well formats to allow high-throughput experiments, letting you get more done in the same amount of time.

Direct ROS quantification

Product
Applications
DCFDA / H2DCFDA - Cellular ROS Assay Kit (ab113851)
Flow cytometry, microplate reader (96- or 384-well plate format)
Cellular Superoxide Detection Assay Kit (ab139477)
Fluorescence microscopy, flow cytometry
ROS/Superoxide Detection Assay Kit (Cell-based) (ab139476)
Fluorescence microscopy, flow cytometry
Cellular Reactive Oxygen Species Detection Assay Kits (ab186027/ab186028/ab186029)
High-throughput screening liquid handling instruments, 96- or 384-well plate format; multiple detection wavelengths available
Hydrogen Peroxide Assay Kit (Cell-based) (ab138874)
High-throughput screening liquid handling instruments, 96- or 384-well plate format; for use in live cells only
Hydrogen Peroxide Assay Kit (Fluorometric - Near Infrared) (ab138886)
High-throughput screening liquid handling instruments, 96- or 384-well plate format; for use in cell supernatants and live cells

Quantification of antioxidant molecules

Product
Readout
Sample types
Total Antioxidant Capacity Assay Kit (ab65329)
Quantitative, colorimetric
Biological fluids, tissue extracts, cell extracts and cell culture media
Ascorbic Acid Assay Kit (Biological Samples) (ab65656)
Quantitative, colorimetric
Biological fluids, tissue extracts, cell extracts and cell culture media
NAD/NADH Assay Kit (ab65348/ab176723)
Quantitative, colorimetric or fluorometric
Cell extracts, tissue extracts
NADP/NADPH Assay Kit (ab65349/ab176724)
Quantitative, colorimetric or fluorometric
Cell extracts, tissue extracts
GSH/GSSG Ratio Detection Assay Kit (ab138881/ab205811)
Quantitative, fluorometric
Urine, plasma, tissue extracts, cell extracts
Intracellular glutathione (GSH) Detection Assay Kit (ab112132)
Flow cytometry, quantitative, fluorometric
Adherent cells, suspension cells

Antioxidant enzyme capacity

Product
Readout
Sample types
GST Activity Assay Kit (ab65325/ab65326)
Quantitative, fluorometric or colorimetric
Biological fluids, tissue extracts, cell extracts
Superoxide Dismutase Activity Assay Kit (ab65354)
Quantitative, colorimetric
Biological fluids, tissue extracts, cell extracts
Glutathione Reductase Assay Kit (ab83461)
Quantitative, colorimetric
Biological fluids, tissue extracts, cell extracts
Xanthine Oxidase Activity Assay Kit (ab102522)
Quantitative, fluorometric or colorimetric
Biological fluids, tissue extracts, cell extracts
Glutathione Peroxidase Assay Kit (ab102530)
Quantitative, colorimetric
Biological fluids, tissue extracts, cell extracts
Aconitase Activity Assay Kit (ab109712)
Quantitative, colorimetric
Cell extracts, tissue extracts
Catalase Specific Activity Assay Kit (ab118184)
Quantitative, luminescent (activity) and colorimetric (quantity)
Cell extracts, tissue extracts