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Radial glia markers

A guide to the most common radial glia markers. We've put together the most commonly used markers for radial glia to help you quickly identify the suitable marker for your cells.

What are radial glia?

Radial glial cells are a specialized type of glial cell that play a foundational role in the development and function of the central nervous system (CNS). Distinguished by their unique radial morphology, these cells have a cell body situated in the ventricular zone and extend long processes toward the pial surface, creating a scaffold that supports the migration of newly generated cells during brain development.

Radial glial cells are primary progenitor cells in the developing nervous system, giving rise to a wide array of cell types, including neurons, astrocytes, and oligodendrocytes. Their ability to generate multiple neural lineages highlights their essential function as neural stem cells within the stem cell niche. In addition to their role as progenitor cells, radial glial cells provide crucial structural and metabolic support to developing neurons and contribute to forming and maintaining the blood-brain barrier through interactions with endothelial cells and other cell populations.

During embryonic development, radial glial cells undergo an epithelial-to-mesenchymal transition, acquiring a more flexible, mesenchymal phenotype. This transition is marked by the expression of specific marker genes, such as vimentin and nestin, which help define their identity and distinguish them from other glial cell types. Radial glial cells also interact with mesenchymal cells and extracellular matrix proteins, further influencing their behavior and the organization of the stem cell niche.

Advances in single-cell RNA sequencing have revolutionized our understanding of radial glial cells by enabling researchers to analyze gene expression at the level of individual cells. This technology has made it possible to define cell types and subpopulations of radial glia based on their unique molecular signatures, shedding light on their diverse roles in the cerebral cortex, spinal cord, and other brain regions.

Importantly, radial glial cells are pivotal during embryonic development and contribute to the adult brain's maintenance and plasticity. In regions such as the hippocampus, they help regulate synaptic plasticity and support the ongoing production of new neurons. The expression of key transcription factors, including SOX2 and PAX6, governs their proliferation, differentiation, and neural stem cell properties throughout life.

Research into radial glial cells continues to uncover their significance in both normal brain function and disease. Alterations in radial glial cell function have been linked to developmental disorders of the cerebral cortex and injuries to the spinal cord, highlighting their potential as targets for therapeutic intervention. As our understanding of these versatile progenitor cells grows, so does the potential for developing new strategies to treat neurological disorders and promote brain repair.

Vimentin

Vimentin is an intermediate filament protein commonly used to identify radial glia cells during brain development. These cells serve as scaffolds for neuronal migration and act as neural progenitors. Vimentin expression reflects the dynamic cytoskeletal changes in radial glia, supporting their structural and proliferative roles. Its presence is especially prominent in early neurogenesis, making it a reliable marker in developmental studies. Researchers often pair vimentin with other markers like SOX2 to better characterize neural stem cell populations.

Multiplex immunohistochemistry - Anti-Vimentin antibody [EPR3776] - Cytoskeleton Marker (AB92547)

Figure 1. Multiplex immunohistochemistry - Anti-Vimentin antibody [EPR3776] - Cytoskeleton Marker (ab92547).

abID
Product name
Applications
Species
Clonality
Citations
ab92547
Anti-Vimentin antibody [EPR3776] - Cytoskeleton Marker
mIHC, IHC-P, WB, ICC/IF, Flow Cyt (Intra)
Mouse, rat, human, African green monkey
Monoclonal
2139
ab316214
Anti-Vimentin antibody [EPR3776] - Chicken IgY (Chimeric)
WB, IHC-P, ICC/IF
Human, mouse, rat
Monoclonal

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PAX6

PAX6 is a transcription factor expressed in radial glia cells during brain development. These cells act as neural progenitors and scaffolds for migrating neurons. PAX6 helps regulate the neurogenic potential of radial glia, influencing their ability to generate neurons in the cerebral cortex. Studies show that altering PAX6 expression can shift glial cells toward or away from neuronal lineages. This makes PAX6 a widely studied marker in developmental neuroscience and stem cell research.

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-PAX6 antibody [EPR15858] (AB195045)

Figure 2. Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-PAX6 antibody [EPR15858] (ab195045).

abID
Product name
Applications
Species
Clonality
Citations
ab195045
Anti-PAX6 antibody [EPR15858]
WB, ICC/IF, IHC-P
Mouse, rat, human
Monoclonal
74
ab78545
Anti-PAX6 antibody [AD2.38]
IHC-P, ICC/IF, IHC-Fr
Mouse, rat, human
Monoclonal
52
ab5790
Anti-PAX6 antibody
WB, ICC/IF, IP
Rat, human, monkey, mouse
Polyclonal
128

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HES1 and HES5

HES1 and HES5 are transcriptional repressors regulated by the Notch signaling pathway. They are expressed in radial glia cells, where they help maintain progenitor identity and suppress premature neuronal differentiation. These genes contribute to the balance between self-renewal and neurogenesis during brain development. HES1 and HES5 expression patterns are often used to identify active neural stem cell populations, particularly in early developmental stages and in studies of neurogenic niches.

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-HES5 antibody [EPR15578] (AB194111)

Figure 3. Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-HES5 antibody [EPR15578] (ab194111).

abID
Product name
Applications
Species
Clonality
Citations
ab108937
Anti-Hes1 antibody [EPR4226]
IHC-P, WB, ICC/IF, Flow Cyt (Intra)
Rat, human
Monoclonal
109
ab71559
Anti-Hes1 antibody
WB, IHC-P, ICC/IF, IHC-Fr
Human, mouse
Polyclonal
146
ab194111
Anti-HES5 antibody [EPR15578]
IP, WB, IHC-P
Mouse, rat, human
Monoclonal
29

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Astrocytic markers: GFAP, GLAST, and BLBP

GFAP, GLAST, and BLBP are widely used markers to identify radial glia cells in the developing and adult brain. GFAP is an intermediate filament protein linked to the astrocytic lineage. GLAST, a glutamate transporter, reflects metabolic activity, while BLBP regulates lipid signaling and cell fate. These markers help define radial glia populations and their transition into astrocytes, supporting neurodevelopment, regeneration, and stem cell biology studies.

Multiplex immunohistochemistry - Anti-GFAP antibody [EPR1034Y] - Astrocyte Marker (AB68428)

Figure 3. Multiplex immunohistochemistry - Anti-GFAP antibody [EPR1034Y] - Astrocyte Marker (ab68428).

abID
Product name
Applications
Species
Clonality
Citations
ab68428
Anti-GFAP antibody [EPR1034Y] - Astrocyte Marker
mIHC, Flow Cyt (Intra), IHC-P, ICC/IF, IP, WB, IHC-Fr
Mouse, rat, human
Monoclonal
151
ab416
Anti-EAAT1 antibody
WB, IHC-P
Rat, human
Polyclonal
144
ab32423
Anti-BLBP antibody
ICC/IF, WB, IHC-P
Mouse, rat, zebrafish, quail
Polyclonal
127

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Adhesion and extracellular matrix molecules: TN-C and N-cadherin

Tenascin-C (TN-C) and N-cadherin are adhesion and extracellular matrix molecules expressed by radial glia cells during brain development. TN-C contributes to the extracellular environment, influencing cell migration and tissue remodeling. N-cadherin mediates cell–cell adhesion, supporting the structural integrity of radial glia and their interactions with neighboring cells. These molecules help maintain radial glia polarity and guide neuronal positioning. Their expression patterns are often used to study neurodevelopmental processes and the transition of radial glia into astrocytes or other glial lineages.

Western blot - Anti-N Cadherin antibody [EPR1791-4] (AB76011)

Figure 4. Western blot - Anti-N Cadherin antibody [EPR1791-4] (ab76011).

abID
Product name
Applications
Species
Clonality
Citations
ab76011
Anti-N Cadherin antibody [EPR1791-4]
WB, IHC-P
Mouse, rat, human
Monoclonal
575
ab18203
Anti-N Cadherin antibody - Intercellular Junction Marker
IHC-P, IP, WB, ICC/IF
Human, mouse, rat
Polyclonal
942
ab108930
Anti-Tenascin C antibody [EPR4219]
WB, IHC-P, IHC-Fr
Mouse, rat, human
Monoclonal
109

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Nestin

Nestin is an intermediate filament protein commonly used to identify neural stem and progenitor cells, including radial glia. It is expressed during early stages of brain development and reflects the dynamic, undifferentiated state of these cells. In radial glia, nestin supports cytoskeletal organization and cellular plasticity, contributing to their role in neurogenesis and migration. Its expression typically decreases as cells differentiate into neurons or glia. Nestin is widely used in developmental neuroscience and regenerative medicine to track progenitor populations and study lineage progression.

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Nestin antibody - Neural Stem Cell Marker (AB134017)

Figure 5. Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-Nestin antibody - Neural Stem Cell Marker (ab134017).

abID
Product name
Applications
Species
Clonality
Citations
ab105389
Anti-Nestin antibody [SP103] - Neural Stem Cell Marker
Flow Cyt (Intra), WB, IHC-P, ICC/IF, IHC-Fr
Human
Monoclonal
95
ab134017
Anti-Nestin antibody - Neural Stem Cell Marker
ICC/IF, WB, IHC-P
Mouse
Polyclonal
38

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SOX2

SPX2, or Spexin 2, is a neuropeptide that has recently gained attention for its expression in neural tissues, including radial glia. While its precise function in radial glia remains under investigation, SPX2 is thought to participate in signaling pathways that influence cell communication and neurodevelopment. Its expression pattern suggests a potential role in maintaining radial glia identity or modulating their interaction with surrounding cells. As research progresses, SPX2 may serve as a complementary marker in studies exploring radial glia heterogeneity and their contribution to brain development and repair.

Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SOX2 antibody [EPR3131] (AB92494)

Figure 6. Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SOX2 antibody [EPR3131] (ab92494).

abID
Product name
Applications
Species
Clonality
Citations
ab92494
Anti-SOX2 antibody [EPR3131]
ICC/IF, WB, sELISA, IHC - Wmt, IHC-P
Mouse, rat, human, Leucoraja erinacea
Monoclonal
296

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References

  1. Bargagna-Mohan P, Hamza A, Kim YE, et al. The tumor inhibitor and antiangiogenic agent withaferin A targets the intermediate filament protein vimentin.  Chem Biol  14(6), 623–634 (2007).
  2. Lamouille S, Xu J, Derynck R. Molecular mechanisms of epithelial–mesenchymal transition.  Nat Rev Mol Cell Biol  15(3), 178–196 (2014).
  3. Graeber MB, Streit WJ, Kreutzberg GW. The microglial cytoskeleton: vimentin is localised within activated cells in situ.  J Neurocytol  17, 573–580 (1988).
  4. Wohl SG, Schmeer CW, et al. In situ dividing and phagocytosing retinal microglia express nestin, vimentin, and NG2 in vivo.  PLoS ONE  6, (2011).
  5. Heins N, Malatesta P, Cecconi F, et al. Glial cells generate neurons: the role of the transcription factor Pax6.  Nat Neurosci  5(4), 308–315 (2002).
  6. Kriegstein AR, Götz M. Radial glia diversity: a matter of cell fate.  Glia  43(1), 37–43 (2003).
  7. Kriegstein A, Alvarez-Buylla A. The glial nature of embryonic and adult neural stem cells.  Annu Rev Neurosci  32, 149–184 (2009).
  8. Jessen KR, Mirsky R. The origin and development of glial cells in peripheral nerves.  Nat Rev Neurosci  6(9), 671–682 (2005).
  9. Kageyama R, Ohtsuka T, Kobayashi T. Roles of Hes genes in neural development.  Dev Growth Differ  50(S1), S97–S103 (2008).
  10. Bylund M, Andersson E, Novitch BG, et al. Vertebrate neurogenesis is counteracted by Sox1–3 activity.  Nat Neurosci  6(11), 1162–1168 (2003).
  11. Papanayotou C, Mey A, Birot AM, et al. A mechanism regulating the onset of Sox2 expression in the embryonic neural plate.  PLoS Biol  6(1), (2008).