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    fireplexmirna-panel--oncology-v2-ab218367.pdf

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FirePlex

FirePlex miRNA Panel – Oncology V2 (ab218367)

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Background-subtracted, normalized with geometric average of three samples of plasma and 3 samples of sera.

    Key features and details

    • Assay type: Multiplex
    • Detection method: Flow cytometry-fluorescent
    • Platform: Multiplex
    • Assay time: 4 hr

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    Overview

    • Product name

      FirePlex miRNA Panel – Oncology V2
    • Detection method

      Flow cytometry-fluorescent
    • Assay type

      Multiplex
    • Assay time

      4h 00m
    • Species reactivity

      Reacts with: Mouse, Rat, Human
    • Product overview

      Multiplex miRNA Assay - Oncology panel (ab218367) are the FirePlex® particles designed to profile up to 65 literature curated miRNA for oncology studies, miRNAs differentially regulated in one or more solid cancers.


      NOTE: FirePlex miRNA panels require the purchase of a Run Buffer. Use our FirePlex Cytometer Setup Kit V2 (ab245835) to select the most appropriate Run Buffer for your flow cytometer.


      Our multiplex miRNA assays use our FirePlex® particle technology with the same sensitivity as PCR, they can be used either directly with 10 µL of biofluids such as serum or plasma with no need for RNA purification; or with 100 pg of purified RNA.


      For a full list of validated sample types, and to learn more about the performance and requirements of these assays, visit here.


      These miRNAs have been chosen based on a detailed study of data in peer-reviewed journals and exhibit differential regulation in whole blood, plasma, serum, peripheral blood mononuclear cells (PBMCs) or isolated exosomes.


      Included in the panel are general markers for multiple cancers, markers specific to specific cancer types, markers that may indicate hemolysis contamination in isolated plasma/serum/exosomes and internal controls to validate assay performance


      It is important to use the normalization procedure in the FirePlex® Analysis Workbench Software to identify the miRNAs that can optimally be used for normalization with your samples. Three miRNAs that are likely to be stably expressed in biofluid samples and may be suitable have been included in this panel.

    • Notes

      To use this product researchers must also purchase the appropriate Core Reagent Kit, either ab218365 for use with purified RNA or ab218342 for use with biofluids.

      FirePlex® is a registered trade mark in the United States and is an unregistered trade mark elsewhere. 

      ** Hu = Human, Ms = Mouse, Rt = Rat, Ath = Arabidopsis thaliana, Oan = Ornithorhynchus anatinus, Cel = Caenorhabditis elegans.  

      # miRNA 21 name  miRNA Sequence (miRBase V21) Sequence homology ** MIMAT ID
      1 hsa-let-7d-5p agagguaguagguugcauaguu Hu, Ms, Rt MIMAT0000065
      2 hsa-let-7g-5p ugagguaguaguuuguacaguu Hu, Ms, Rt MIMAT0000414
      3 hsa-let-7i-5p ugagguaguaguuugugcuguu Hu, Ms, Rt MIMAT0000415
      4 hsa-miR-103a-3p agcagcauuguacagggcuauga Hu, Ms, Rt MIMAT0000101
      5 hsa-miR-106a-5p aaaagugcuuacagugcagguag Hu MIMAT0000103
      6 hsa-miR-106b-5p uaaagugcugacagugcagau Hu, Ms, Rt MIMAT0000680
      7 hsa-miR-107 agcagcauuguacagggcuauca Hu, Ms, Rt MIMAT0000104
      8 hsa-miR-10b-5p uacccuguagaaccgaauuugug Hu, Ms, Rt MIMAT0000254
      9 hsa-miR-122-5p uggagugugacaaugguguuug Hu, Ms, Rt MIMAT0000421
      10 hsa-miR-125b-5p ucccugagacccuaacuuguga Hu, Ms, Rt MIMAT0000423
      11 hsa-miR-126-3p ucguaccgugaguaauaaugcg Hu, Ms, Rt MIMAT0000445
      12 hsa-miR-127-3p ucggauccgucugagcuuggcu Hu, Ms, Rt MIMAT0000446
      13 hsa-miR-130a-3p cagugcaauguuaaaagggcau Hu, Ms, Rt MIMAT0000425
      14 hsa-miR-141-3p uaacacugucugguaaagaugg Hu, Ms, Rt MIMAT0000432
      15 hsa-miR-145-5p guccaguuuucccaggaaucccu Hu, Ms, Rt MIMAT0000437
      16 hsa-miR-146a-5p ugagaacugaauuccauggguu Hu, Ms, Rt MIMAT0000449
      17 hsa-miR-148a-3p ucagugcacuacagaacuuugu Hu, Ms MIMAT0000243
      18 hsa-miR-148b-3p ucagugcaucacagaacuuugu Hu, Ms, Rt MIMAT0000759
      19 hsa-miR-150-5p ucucccaacccuuguaccagug Hu, Ms, Rt MIMAT0000451
      20 hsa-miR-151a-3p cuagacugaagcuccuugagg Hu MIMAT0000757
      21 hsa-miR-155-5p uuaaugcuaaucgugauaggggu Hu MIMAT0000646
      22 hsa-miR-15b-5p uagcagcacaucaugguuuaca Hu, Ms, Rt MIMAT0000417
      23 hsa-miR-16-5p uagcagcacguaaauauuggcg Hu, Ms, Rt MIMAT0000069
      24 hsa-miR-17-5p caaagugcuuacagugcagguag Hu, Ms, Rt MIMAT0000070
      25 hsa-miR-181a-5p aacauucaacgcugucggugagu Hu, Ms, Rt MIMAT0000256
      26 hsa-miR-181b-5p aacauucauugcugucggugggu Hu, Ms, Rt MIMAT0000257
      27 hsa-miR-182-5p uuuggcaaugguagaacucacacu Hu MIMAT0000259
      28 hsa-miR-187-3p ucgugucuuguguugcagccgg Hu, Ms, Rt MIMAT0000262
      29 hsa-miR-18a-5p uaaggugcaucuagugcagauag Hu, Ms, Rt MIMAT0000072
      30 hsa-miR-192-5p cugaccuaugaauugacagcc Hu, Ms, Rt MIMAT0000222
      31 hsa-miR-195-5p uagcagcacagaaauauuggc Hu, Ms, Rt MIMAT0000461
      32 hsa-miR-199a-3p acaguagucugcacauugguua Hu, Ms, Rt MIMAT0000232
      33 hsa-miR-199a-5p cccaguguucagacuaccuguuc Hu, Ms, Rt MIMAT0000231
      34 hsa-miR-19a-3p ugugcaaaucuaugcaaaacuga Hu, Ms, Rt MIMAT0000073
      35 hsa-miR-200b-3p uaauacugccugguaaugauga Hu, Ms MIMAT0000318
      36 hsa-miR-200c-3p uaauacugccggguaaugaugga Hu, Ms MIMAT0000617
      37 hsa-miR-205-5p uccuucauuccaccggagucug Hu, Ms MIMAT0000266
      38 hsa-miR-20a-5p uaaagugcuuauagugcagguag Hu, Ms, Rt MIMAT0000075
      39 hsa-miR-210-3p cugugcgugugacagcggcuga Hu, Ms, Rt MIMAT0000267
      40 hsa-miR-21-5p uagcuuaucagacugauguuga Hu, Ms, Rt MIMAT0000076
      41 ath-mir167d ugaagcugccagcaugaucugg Ath MIMAT0000905
      42 hsa-miR-221-3p agcuacauugucugcuggguuuc Hu, Ms, Rt MIMAT0000278
      43 hsa-miR-222-3p agcuacaucuggcuacugggu Hu, Ms, Rt MIMAT0000279
      44 hsa-miR-223-3p ugucaguuugucaaauacccca Hu, Ms MIMAT0000280
      45 hsa-miR-22-3p aagcugccaguugaagaacugu Hu, Ms, Rt MIMAT0000077
      46 hsa-miR-25-3p cauugcacuugucucggucuga Hu, Ms, Rt MIMAT0000081
      47 hsa-miR-26a-5p uucaaguaauccaggauaggcu Hu, Ms, Rt MIMAT0000082
      48 hsa-miR-27a-3p uucacaguggcuaaguuccgc Hu, Ms, Rt MIMAT0000084
      49 hsa-miR-29a-3p uagcaccaucugaaaucgguua Hu, Ms, Rt MIMAT0000086
      50 hsa-miR-29b-3p uagcaccauuugaaaucaguguu Hu, Ms, Rt MIMAT0000100
      51 hsa-miR-29c-3p uagcaccauuugaaaucgguua Hu, Ms, Rt MIMAT0000681
      52 hsa-miR-320a aaaagcuggguugagagggcga Hu, Ms, Rt MIMAT0000510
      53 hsa-miR-335-5p ucaagagcaauaacgaaaaaugu Hu, Ms, Rt MIMAT0000765
      54 hsa-miR-34a-5p uggcagugucuuagcugguugu Hu, Ms, Rt MIMAT0000255
      55 hsa-miR-34b-3p caaucacuaacuccacugccau Hu MIMAT0004676
      56 hsa-miR-375 uuuguucguucggcucgcguga Hu, Ms, Rt MIMAT0000728
      57 hsa-miR-376c-3p aacauagaggaaauuccacgu Hu MIMAT0000720
      58 hsa-miR-378a-3p acuggacuuggagucagaaggc Hu MIMAT0000732
      59 hsa-miR-409-3p gaauguugcucggugaaccccu Hu, Ms MIMAT0001639
      60 hsa-miR-451a aaaccguuaccauuacugaguu Hu, Ms, Rt MIMAT0001631
      61 hsa-miR-483-5p aagacgggaggaaagaagggag Hu MIMAT0004761
      62 hsa-miR-486-5p uccuguacugagcugccccgag Hu, Ms, Rt MIMAT0002177
      63 hsa-miR-574-3p cacgcucaugcacacacccaca Hu, Ms MIMAT0003239
      64 cel-mir-70-3p uaauacgucguugguguuuccau Cel MIMAT0000042
      65 hsa-miR-652-3p aauggcgccacuaggguugug Hu, Ms, Rt MIMAT0003322
      66 hsa-miR-92a-3p uauugcacuugucccggccugu Hu MIMAT0000092
      67 hsa-miR-93-5p caaagugcuguucgugcagguag Hu, Ms, Rt MIMAT0000093
      68 oan-miR-7417-5p uuccccacucugagcacacagc Oan MIMAT0028982
      69 x-control x-control N/A  
      70 blank blank N/A  

       

    • Platform

      Multiplex

    Properties

    • Storage instructions

      Store at +4°C. Please refer to protocols.
    • Components 1 x 48 tests 1 x 96 tests
      FirePlex® Particle Mix (Circulating) 1 x 1750µl 1 x 3500µl

    Associated products

    • Related Buffer

      • FirePlex Cytometer Run Buffer 2 (ab234450)
      • FirePlex Cytometer Run Buffer 1 (ab245836)
      • FirePlex Cytometer Run Buffer 3 (ab245837)
    • Related Products

      • Vacuum manifold for 96 well filter plates (ab204067)

    Images

    • Background-subtracted, normalized with geometric average of three samples of plasma and 3 samples of sera.
      Background-subtracted, normalized with geometric average of three samples of plasma and 3 samples of sera.

      Samples of human plasma and sera were run in triplicate on the Circulating Oncology Fixed Panel using the Multiplex Circulating miRNA Assay (biofluids). Results were background subtracted and normalized using geometric average, profiling 68 miRNAs per well for each sample.

    Protocols

    • Protocol Booklet

    Click here to view the general protocols

    Datasheets and documents

    • SDS download

    • Datasheet download

      Download

    References (2)

    Publishing research using ab218367? Please let us know so that we can cite the reference in this datasheet.

    ab218367 has been referenced in 2 publications.

    • Hoss AG  et al. miR-10b-5p expression in Huntington's disease brain relates to age of onset and the extent of striatal involvement. BMC Med Genomics 8:10 (2015). PubMed: 25889241
    • Le MT  et al. miR-200-containing extracellular vesicles promote breast cancer cell metastasis. J Clin Invest 124:5109-28 (2014). PubMed: 25401471

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