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    human-runx1-aml1-knockout-hela-cell-line-ab265486.pdf

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Human RUNX1 (AML1) knockout HeLa cell line (ab265486)

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Sanger Sequencing - Human RUNX1 knockout HeLa cell line (ab265486)

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    Overview

    • Product name

      Human RUNX1 (AML1) knockout HeLa cell line
      See all RUNX1 / AML1 lysates
    • Parental Cell Line

      HeLa
    • Organism

      Human
    • Mutation description

      Knockout achieved by using CRISPR/Cas9, Homozygous: 86 bp insertion in exon 4
    • Passage number

      <20
    • Knockout validation

      Sanger Sequencing
    • Biosafety level

      2
    • General notes

      Recommended control: Human wild-type HeLa cell line (ab255928). Please note a wild-type cell line is not automatically included with a knockout cell line order, if required please add recommended wild-type cell line at no additional cost using the code WILDTYPE-TMTK1.

      Cryopreservation cell medium: Cell Freezing Medium-DMSO Serum free media, contains 8.7% DMSO in MEM supplemented with methyl cellulose.

      Culture medium: DMEM (High Glucose) + 10% FBS

      Initial handling guidelines: Upon arrival, the vial should be stored in liquid nitrogen vapor phase and not at -80°C. Storage at -80°C may result in loss of viability.

      1. Thaw the vial in 37°C water bath for approximately 1-2 minutes.
      2. Transfer the cell suspension (0.8 mL) to a 15 mL/50 mL conical sterile polypropylene centrifuge tube containing 8.4 mL pre-warmed culture medium, wash vial with an additional 0.8 mL culture medium (total volume 10 mL) to collect remaining cells, and centrifuge at 201 x g (rcf) for 5 minutes at room temperature. 10 mL represents minimum recommended dilution. 20 mL represents maximum recommended dilution.
      3. Resuspend the cell pellet in 5 mL pre-warmed culture medium and count using a haemocytometer or alternative cell counting method. Based on cell count, seed cells in an appropriate cell culture flask at a density of 2x104 cells/cm2. Seeding density is given as a guide only and should be scaled to align with individual lab schedules.
      4. Incubate the culture at 37°C incubator with 5% CO2. Cultures should be monitored daily.

      Subculture guidelines:

      • All seeding densities should be based on cell counts gained by established methods.
      • A guide seeding density of 2x104 cells/cm2 is recommended.
      • A partial media change 24 hours prior to subculture may be helpful to encourage growth, if required.
      • Cells should be passaged when they have achieved 80-90% confluence.

      This product is subject to limited use licenses from The Broad Institute, ERS Genomics Limited and Sigma-Aldrich Co. LLC, and is developed with patented technology. For full details of the licenses and patents please refer to our limited use license and patent pages.

    Properties

    • Number of cells

      1 x 106 cells/vial, 1 mL
    • Viability

      ~80%
    • Adherent /Suspension

      Adherent
    • Tissue

      Cervix
    • Cell type

      epithelial
    • Disease

      Adenocarcinoma
    • Gender

      Female
    • STR Analysis

      Amelogenin X D5S818: 11, 12 D13S317: 12, 13.3 D7S820: 8, 12 D16S539: 9, 10 vWA: 16, 18 TH01: 7 TPOX: 8,12 CSF1PO: 9, 10
    • Antibiotic resistance

      Puromycin 1.00µg/ml
    • Mycoplasma free

      Yes
    • Storage instructions

      Shipped on Dry Ice. Store in liquid nitrogen.
    • Storage buffer

      Constituents: 8.7% Dimethylsulfoxide, 2% Cellulose, methyl ether
    • Research areas

      • Neuroscience
      • Neurology process
      • Neurogenesis
      • Epigenetics and Nuclear Signaling
      • Transcription
      • Other factors
      • Stem Cells
      • Hematopoietic Progenitors
      • Intracellular Molecules
      • Epigenetics and Nuclear Signaling
      • Chromatin Binding Proteins
      • DNA / RNA binding
      • Cancer
      • Oncoproteins/suppressors
      • Oncoproteins
      • Transcription factors
      • Stem Cells
      • Hematopoietic Progenitors
      • Hemangioblast
      • Developmental Biology
      • Organogenesis
      • Hematopoietic system development
      • Neuroscience
      • Development

    Target

    • Function

      CBF binds to the core site, 5'-PYGPYGGT-3', of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL-3 and GM-CSF promoters. The alpha subunit binds DNA and appears to have a role in the development of normal hematopoiesis. Isoform AML-1L interferes with the transactivation activity of RUNX1. Acts synergistically with ELF4 to transactivate the IL-3 promoter and with ELF2 to transactivate the mouse BLK promoter. Inhibits MYST4-dependent transcriptional activation.
    • Tissue specificity

      Expressed in all tissues examined except brain and heart. Highest levels in thymus, bone marrow and peripheral blood.
    • Involvement in disease

      Note=A chromosomal aberration involving RUNX1/AML1 is a cause of M2 type acute myeloid leukemia (AML-M2). Translocation t(8;21)(q22;q22) with RUNX1T1.
      Note=A chromosomal aberration involving RUNX1/AML1 is a cause of therapy-related myelodysplastic syndrome (T-MDS). Translocation t(3;21)(q26;q22) with EAP or MECOM.
      Note=A chromosomal aberration involving RUNX1/AML1 is a cause of chronic myelogenous leukemia (CML). Translocation t(3;21)(q26;q22) with EAP or MECOM.
      Note=A chromosomal aberration involving RUNX1/AML1 is found in childhood acute lymphoblastic leukemia (ALL). Translocation t(12;21)(p13;q22) with TEL. The translocation fuses the 3'-end of TEL to the alternate 5'-exon of AML-1H.
      Note=A chromosomal aberration involving RUNX1 is found in acute leukemia. Translocation t(11,21)(q13;q22) that forms a MACROD1-RUNX1 fusion protein.
      Defects in RUNX1 are the cause of familial platelet disorder with associated myeloid malignancy (FPDMM) [MIM:601399]. FPDMM is an autosomal dominant disease characterized by qualitative and quantitative platelet defects, and propensity to develop acute myelogenous leukemia.
      Note=A chromosomal aberration involving RUNX1/AML1 is found in therapy-related myeloid malignancies. Translocation t(16;21)(q24;q22) that forms a RUNX1-CBFA2T3 fusion protein.
      Note=A chromosomal aberration involving RUNX1/AML1 is a cause of chronic myelomonocytic leukemia. Inversion inv(21)(q21;q22) with USP16.
    • Sequence similarities

      Contains 1 Runt domain.
    • Domain

      A proline/serine/threonine rich region at the C-terminus is necessary for transcriptional activation of target genes.
    • Post-translational
      modifications

      Phosphorylated in its C-terminus upon IL-6 treatment. Phosphorylation enhances interaction with MYST3.
      Methylated.
    • Cellular localization

      Nucleus.
    • Target information above from: UniProt accession Q01196 The UniProt Consortium
      The Universal Protein Resource (UniProt) in 2010
      Nucleic Acids Res. 38:D142-D148 (2010) .

      Information by UniProt

    Associated products

    • KO cell lysates

      • Human RUNX1 (AML1) knockout HeLa cell lysate (ab257648)
    • KO cell pellets

      • Human RUNX1 (AML1) knockout HeLa cell pellet (ab278883)

    Images

    • Sanger Sequencing - Human RUNX1 knockout HeLa cell line (ab265486)
      Sanger Sequencing - Human RUNX1 knockout HeLa cell line (ab265486)
      Homozygous: 86 bp insertion in exon 4.

    Protocols

    • Hemocytometer protocol
    • Mammalian cell tissue culture techniques protocol

    Click here to view the general protocols

    Datasheets and documents

    • SDS download

    • Datasheet download

      Download

    References (0)

    Publishing research using ab265486? Please let us know so that we can cite the reference in this datasheet.

    ab265486 has not yet been referenced specifically in any publications.

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