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    products/cell-lines/human-rab10-knockout-a549-cell-line-ab261868.pdf

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Signal Transduction Signaling Pathway G Protein Signaling Small G Proteins Ras Family
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Human RAB10 knockout A549 cell line (ab261868)

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Western blot - Human RAB10 knockout A549 cell line (ab261868)
  • Immunocytochemistry/ Immunofluorescence - Human RAB10 knockout A549 cell line (ab261868)
  • Western blot - Human RAB10 knockout A549 cell line (ab261868)
  • Immunocytochemistry/ Immunofluorescence - Human RAB10 knockout A549 cell line (ab261868)
  • Next Generation Sequencing - Human RAB10 knockout A549 cell line (ab261868)

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Human ICAM1 knockout HeLa cell line (ab261742)

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Overview

  • Product name

    Human RAB10 knockout A549 cell line
  • Parental Cell Line

    A549
  • Organism

    Human
  • Mutation description

    Knockout achieved by CRISPR/Cas9; X = 1 bp insertion; Frameshift = 100%
  • Passage number

    <20
  • Knockout validation

    Immunocytochemistry (ICC), Next Generation Sequencing (NGS), Western Blot (WB)
  • Tested applications

    Suitable for: WB, ICCmore details
  • Biosafety level

    1
  • General notes

    Recommended control: Human wild-type A549 cell line (ab259777). Please note a wild-type cell line is not automatically included with a knockout cell line order, if required please add recommended wild-type cell line at no additional cost using the code WILDTYPE-TMTK1.

    Cryopreservation cell medium: Cell Freezing Medium-DMSO Serum free media, contains 8.7% DMSO in MEM supplemented with methyl cellulose.

    Culture medium: DMEM:Hams F12 + 5% FBS

    Initial handling guidelines: Upon arrival, the vial should be stored in liquid nitrogen vapor phase and not at -80°C. Storage at -80°C may result in loss of viability.

    1. Thaw the vial in 37°C water bath for approximately 1-2 minutes.
    2. Transfer the cell suspension (0.8 mL) to a 15 mL/50 mL conical sterile polypropylene centrifuge tube containing 8.4 mL pre-warmed culture medium, wash vial with an additional 0.8 mL culture medium (total volume 10 mL) to collect remaining cells, and centrifuge at 201 x g (rcf) for 5 minutes at room temperature. 10 mL represents minimum recommended dilution. 20 mL represents maximum recommended dilution.
    3. Resuspend the cell pellet in 5 mL pre-warmed culture medium and count using a haemocytometer or alternative cell counting method. Based on cell count, seed cells in an appropriate cell culture flask at a density of 2x103-1x104 cells/cm2. Seeding density is given as a guide only and should be scaled to align with individual lab schedules.
    4. Incubate the culture at 37°C incubator with 5% CO2. Cultures should be monitored daily.

    Subculture guidelines:

    • All seeding densities should be based on cell counts gained by established methods.
    • A guide seeding density of 6x104 cells/cm2 is recommended.
    • A partial media change 24 hours prior to subculture may be helpful to encourage growth, if required.
    • Cells should be passaged when they have achieved 80-90% confluence.
    • Do not exceed 7x104 cells/cm2.

    This product is subject to limited use licenses from The Broad Institute, ERS Genomics Limited and Sigma-Aldrich Co. LLC, and is developed with patented technology. For full details of the licenses and patents please refer to our limited use license and patent pages.

Properties

  • Number of cells

    1 x 106 cells/vial, 1 mL
  • Viability

    ~80%
  • Adherent /Suspension

    Adherent
  • Tissue

    Lung
  • Cell type

    epithelial
  • Disease

    Carcinoma
  • Gender

    Male
  • Mycoplasma free

    Yes
  • Storage instructions

    Shipped on Dry Ice. Store in liquid nitrogen.
  • Storage buffer

    Constituents: 8.7% Dimethylsulfoxide, 2% Cellulose, methyl ether
  • Research areas

    • Signal Transduction
    • Signaling Pathway
    • G Protein Signaling
    • Small G Proteins
    • Ras Family
    • Signal Transduction
    • Protein Trafficking
    • Vesicle Transport
    • Regulation
    • Neuroscience
    • Processes

Target

  • Function

    The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion (By similarity). That Rab is mainly involved in the biosynthetic transport of proteins from the Golgi to the plasma membrane. Regulates, for instance, SLC2A4/GLUT4 glucose transporter-enriched vesicles delivery to the plasma membrane. In parallel, it regulates the transport of TLR4, a toll-like receptor to the plasma membrane and therefore may be important for innate immune response. Plays also a specific role in asymmetric protein transport to the plasma membrane within the polarized neuron and epithelial cells. In neurons, it is involved in axonogenesis through regulation of vesicular membrane trafficking toward the axonal plasma membrane while in epithelial cells, it regulates transport from the Golgi to the basolateral membrane. Moreover, may play a role in the basolateral recycling pathway and in phagosome maturation. According to PubMed:23263280, may play a role in endoplasmic reticulum dynamics and morphology controlling tubulation along microtubules and tubules fusion.
  • Sequence similarities

    Belongs to the small GTPase superfamily. Rab family.
  • Cellular localization

    Cytoplasmic vesicle membrane. Golgi apparatus membrane. Golgi apparatus, trans-Golgi network membrane. Endosome membrane. Recycling endosome membrane. Cytoplasmic vesicle, phagosome membrane. Cell projection, cilium. Endoplasmic reticulum membrane. Associates with SLC2A4/GLUT4 storage vesicles (PubMed:22908308). Localizes to the base of the cilium (PubMed:20576682). Transiently associates with phagosomes (By similarity). Localizes to the endoplasmic reticulum at domains of new tubule growth (PubMed:23263280).
  • Target information above from: UniProt accession P61026 The UniProt Consortium
    The Universal Protein Resource (UniProt) in 2010
    Nucleic Acids Res. 38:D142-D148 (2010) .

    Information by UniProt

Associated products

  • KO cell lysates

    • Human RAB10 knockout A549 cell lysate (ab261677)
  • Related Products

    • Anti-RAB10 antibody [EPR13242] (ab181367)
    • Anti-RAB10 antibody [EPR13242] - BSA and Azide free (ab224886)
    • Anti-RAB10 antibody [MJF-R23] (ab237703)
    • Anti-RAB10 antibody [MJF-R23] - BSA and Azide free (ab238655)
    • Anti-FHL2 antibody [EPR17860-20] - BSA and Azide free (ab251378)

Applications

The Abpromise guarantee

Our Abpromise guarantee covers the use of ab261868 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Application Abreviews Notes
WB
Use at an assay dependent concentration.
ICC
Use at an assay dependent concentration.
Notes
WB
Use at an assay dependent concentration.
ICC
Use at an assay dependent concentration.

Images

  • Western blot - Human RAB10 knockout A549 cell line (ab261868)
    Western blot - Human RAB10 knockout A549 cell line (ab261868)
    All lanes : Anti-RAB10 antibody [MJF-R23] (ab237703) at 1/1000 dilution

    Lane 1 : Wild-type A549 (Human lung carcinoma cell line) whole cell lysate
    Lane 2 : RAB10 knockout A549 (Human lung carcinoma cell line) whole cell lysate
    Lane 3 : HeLa (Human epithelial cell line from cervix adenocarcinoma) whole cell lysate
    Lane 4 : MCF7 (Human breast adenocarcinoma cell line) whole cell lysate

    Lysates/proteins at 20 µg per lane.

    Performed under reducing conditions.

    Observed band size: 25 kDa why is the actual band size different from the predicted?



    Lanes 1 - 4: Merged signal (red and green). Green - ab237703 observed at 25 kDa. Red - loading control, ab8245, observed at 37 kDa.

    ab237703 was shown to recognize RAB10 in wild-type A549 cells as signal was lost at the expected MW in RAB10 knockout cell line ab261868 (knockout cell lysate ab261677). Additional cross-reactive bands were observed in the wild-type and knockout samples. Wild-type and RAB10 knockout samples were subjected to SDS-PAGE. Ab237703 and ab8245 (Mouse anti GAPDH loading control) were incubated overnight at 4°C at 1/1000 dilution and 1/20000 dilution respectively. Blots were developed with Goat anti-Rabbit IgG H&L (IRDye® 800CW) preabsorbed ab216773 and Goat anti-Mouse IgG H&L (IRDye® 680RD) preabsorbed ab216776 secondary antibodies at 1/20000 dilution for 1 hour at room temperature before imaging.

  • Immunocytochemistry/ Immunofluorescence - Human RAB10 knockout A549 cell line (ab261868)
    Immunocytochemistry/ Immunofluorescence - Human RAB10 knockout A549 cell line (ab261868)

    Immunofluorescent analysis of 4% paraformaldehyde-fixed, 0.1% saponin permeabilized A549 wild-type and knockout cells (ab261868) labeling RAB10 (red) with ab237703 at 0.5 μg/ml, followed by anti-Rabbit secondary at 1/1000 dilution. The nuclear counter stain is DAPI (blue). 

  • Western blot - Human RAB10 knockout A549 cell line (ab261868)
    Western blot - Human RAB10 knockout A549 cell line (ab261868)
    All lanes : Anti-RAB10 antibody [EPR13242] (ab181367) at 1/1000 dilution

    Lane 1 : Wild-type A549 (Human lung carcinoma cell line) whole cell lysate
    Lane 2 : RAB10 knockout A549 (Human lung carcinoma cell line) whole cell lysate
    Lane 3 : HeLa (human epithelial cell line from cervix adenocarcinoma) whole cell lysate
    Lane 4 : MCF7 (Human breast adenocarcinoma cell line) whole cell lysate

    Lysates/proteins at 20 µg per lane.

    Performed under reducing conditions.

    Observed band size: 25 kDa why is the actual band size different from the predicted?



    Lanes 1 - 4: Merged signal (red and green). Green - ab181367 observed at 25 kDa. Red - loading control, ab8245, observed at 37 kDa.

    ab181367 was shown to specifically react with RAB10 in wild-type A549 cells as signal was lost in RAB10 knockout cell line ab261868 (knockout cell lysate ab261677). Wild-type and RAB10 knockout samples were subjected to SDS-PAGE. Ab181367 and ab8245 (Mouse anti GAPDH loading control) were incubated overnight at 4°C at 1/1000 dilution and 1/20000 dilution respectively. Blots were developed with Goat anti-Rabbit IgG H&L (IRDye® 800CW) preabsorbed ab216773 and Goat anti-Mouse IgG H&L (IRDye® 680RD) preabsorbed ab216776 secondary antibodies at 1/20000 dilution for 1 hour at room temperature before imaging. 

  • Immunocytochemistry/ Immunofluorescence - Human RAB10 knockout A549 cell line (ab261868)
    Immunocytochemistry/ Immunofluorescence - Human RAB10 knockout A549 cell line (ab261868)

    Immunofluorescent analysis of 4% paraformaldehyde-fixed, 0.1% saponin permeabilized A549 wild-type and knockout cells (ab261868) labeling RAB10 (red) with ab237703 at 0.5 μg/ml, followed by anti-Rabbit secondary at 1/1000 dilution. The nuclear counter stain is DAPI (blue). 

  • Next Generation Sequencing - Human RAB10 knockout A549 cell line (ab261868)
    Next Generation Sequencing - Human RAB10 knockout A549 cell line (ab261868)

    X = 1 bp insertion

Protocols

  • Hemocytometer protocol
  • Mammalian cell tissue culture techniques protocol

Click here to view the general protocols

Datasheets and documents

  • SDS download

  • Datasheet download

    Download

References (0)

Publishing research using ab261868? Please let us know so that we can cite the reference in this datasheet.

ab261868 has not yet been referenced specifically in any publications.

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