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  1. Link

    products/primary-antibodies/satb1-antibody-epr3951-ab109122.pdf

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Epigenetics and Nuclear Signaling Transcription Other factors
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Validated using a knockout cell lineRecombinantRabMAb

Recombinant Anti-SATB1 antibody [EPR3951] (ab109122)

  • Datasheet
  • SDS
Reviews (2) Submit a question References (13)

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Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Immunoprecipitation - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Flow Cytometry - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Immunocytochemistry/ Immunofluorescence - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
  • Anti-SATB1 antibody [EPR3951] (ab109122)

Key features and details

  • Produced recombinantly (animal-free) for high batch-to-batch consistency and long term security of supply
  • Rabbit monoclonal [EPR3951] to SATB1
  • Suitable for: IP, ICC/IF, WB, IHC-P, Flow Cyt
  • Knockout validated
  • Reacts with: Mouse, Rat, Human

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Overview

  • Product name

    Anti-SATB1 antibody [EPR3951]
    See all SATB1 primary antibodies
  • Description

    Rabbit monoclonal [EPR3951] to SATB1
  • Host species

    Rabbit
  • Tested applications

    Suitable for: IP, ICC/IF, WB, IHC-P, Flow Cytmore details
  • Species reactivity

    Reacts with: Mouse, Rat, Human
  • Immunogen

    Synthetic peptide. This information is proprietary to Abcam and/or its suppliers.

  • Positive control

    • WB: HAP1, Jurkat and THP1 whole cell lysate.
  • General notes

    This product is a recombinant monoclonal antibody, which offers several advantages including:

    • - High batch-to-batch consistency and reproducibility
    • - Improved sensitivity and specificity
    • - Long-term security of supply
    • - Animal-free production
    For more information see here.

    Our RabMAb® technology is a patented hybridoma-based technology for making rabbit monoclonal antibodies. For details on our patents, please refer to RabMAb® patents.

    We are constantly working hard to ensure we provide our customers with best in class antibodies. As a result of this work we are pleased to now offer this antibody in purified format. We are in the process of updating our datasheets. The purified format is designated 'PUR' on our product labels. If you have any questions regarding this update, please contact our Scientific Support team.

Properties

  • Form

    Liquid
  • Storage instructions

    Shipped at 4°C. Store at +4°C short term (1-2 weeks). Upon delivery aliquot. Store at -20°C. Avoid freeze / thaw cycle.
  • Storage buffer

    pH: 7.20
    Preservative: 0.01% Sodium azide
    Constituents: 59% PBS, 40% Glycerol (glycerin, glycerine), 0.05% BSA
  • Concentration information loading...
  • Purity

    Protein A purified
  • Clonality

    Monoclonal
  • Clone number

    EPR3951
  • Isotype

    IgG
  • Research areas

    • Epigenetics and Nuclear Signaling
    • Transcription
    • Other factors
    • Epigenetics and Nuclear Signaling
    • Transcription
    • Co-factors
    • Epigenetics and Nuclear Signaling
    • Chromatin Binding Proteins
    • DNA / RNA binding

Associated products

  • Alternative Versions

    • HRP Anti-SATB1 antibody [EPR3951] (ab203964)
    • Anti-SATB1 antibody [EPR3951] - BSA and Azide free (ab239944)
  • Compatible Secondaries

    • Goat Anti-Rabbit IgG H&L (Alexa Fluor® 488) (ab150077)
    • Goat Anti-Rabbit IgG H&L (HRP) (ab205718)
  • Isotype control

    • Rabbit IgG, monoclonal [EPR25A] - Isotype Control (ab172730)

Applications

The Abpromise guarantee

Our Abpromise guarantee covers the use of ab109122 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Application Abreviews Notes
IP
1/20.
ICC/IF
1/50.
WB
1/1000. Predicted molecular weight: 86 kDa.
IHC-P (1)
1/500. Perform heat mediated antigen retrieval before commencing with IHC staining protocol.

heat up to 98 degrees C, below boiling, and then let cool for 10-20 min.

Flow Cyt
1/20.
Notes
IP
1/20.
ICC/IF
1/50.
WB
1/1000. Predicted molecular weight: 86 kDa.
IHC-P
1/500. Perform heat mediated antigen retrieval before commencing with IHC staining protocol.

heat up to 98 degrees C, below boiling, and then let cool for 10-20 min.

Flow Cyt
1/20.

Target

  • Function

    Crucial silencing factor contributing to the initiation of X inactivation mediated by Xist RNA that occurs during embryogenesis and in lymphoma (By similarity). Binds to DNA at special AT-rich sequences, the consensus SATB1-binding sequence (CSBS), at nuclear matrix- or scaffold-associated regions. Thought to recognize the sugar-phosphate structure of double-stranded DNA. Transcriptional repressor controlling nuclear and viral gene expression in a phosphorylated and acetylated status-dependent manner, by binding to matrix attachment regions (MARs) of DNA and inducing a local chromatin-loop remodeling. Acts as a docking site for several chromatin remodeling enzymes (e.g. PML at the MHC-I locus) and also by recruiting corepressors (HDACs) or coactivators (HATs) directly to promoters and enhancers. Modulates genes that are essential in the maturation of the immune T-cell CD8SP from thymocytes. Required for the switching of fetal globin species, and beta- and gamma-globin genes regulation during erythroid differentiation. Plays a role in chromatin organization and nuclear architecture during apoptosis. Interacts with the unique region (UR) of cytomegalovirus (CMV). Alu-like motifs and SATB1-binding sites provide a unique chromatin context which seems preferentially targeted by the HIV-1 integration machinery. Moreover, HIV-1 Tat may overcome SATB1-mediated repression of IL2 and IL2RA (interleukin) in T-cells by binding to the same domain than HDAC1. Delineates specific epigenetic modifications at target gene loci, directly upregulating metastasis-associated genes while downregulating tumor-suppressor genes. Reprograms chromatin organization and the transcription profiles of breast tumors to promote growth and metastasis.
  • Tissue specificity

    Expressed predominantly in thymus.
  • Sequence similarities

    Belongs to the CUT homeobox family.
    Contains 2 CUT DNA-binding domains.
    Contains 1 homeobox DNA-binding domain.
  • Post-translational
    modifications

    Sumoylated. Sumoylation promotes cleavage by caspases.
    Phosphorylated by PKC. Acetylated by PCAF. Phosphorylated form interacts with HDAC1, but unphosphorylated form interacts with PCAF. DNA binding properties are activated by phosphorylation and inactivated by acetylation. In opposition, gene expression is down-regulated by phosphorylation but up-regulated by acetylation.
    Cleaved at Asp-254 by caspase-3 and caspase-6 during T-cell apoptosis in thymus and during B-cell stimulation. The cleaved forms can not dimerize and lose transcription regulation function because of impaired DNA and chromatin association.
  • Cellular localization

    Nucleus matrix. Nucleus > PML body. Organized into a cage-like network anchoring loops of heterochromatin and tethering specialized DNA sequences. When sumoylated, localized in promyelocytic leukemia nuclear bodies.
  • Target information above from: UniProt accession Q01826 The UniProt Consortium
    The Universal Protein Resource (UniProt) in 2010
    Nucleic Acids Res. 38:D142-D148 (2010) .

    Information by UniProt
  • Database links

    • Entrez Gene: 6304 Human
    • Entrez Gene: 20230 Mouse
    • Entrez Gene: 316164 Rat
    • Omim: 602075 Human
    • SwissProt: Q01826 Human
    • SwissProt: Q60611 Mouse
    • Unigene: 517717 Human
    • Unigene: 311655 Mouse
    • Form

      There are 2 isoforms produced by alternative splicing.
    • Alternative names

      • DNA binding protein SATB1 antibody
      • DNA-binding protein SATB1 antibody
      • SATB homeobox 1 antibody
      • SATB1 antibody
      • SATB1_HUMAN antibody
      • Special AT rich sequence binding protein 1 (binds to nuclear matrix/scaffold associating DNA) antibody
      • Special AT rich sequence binding protein 1 antibody
      • Special AT-rich sequence-binding protein 1 antibody
      see all

    Images

    • Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
      Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
      All lanes : Anti-SATB1 antibody [EPR3951] (ab109122) at 1/1000 dilution (Purified)

      Lane 1 : LNCaP (Human prostate carcinoma epithelial cell) whole cell lysate
      Lane 2 : THP-1 (Human monocytic leukemia monocyte) whole cell lysate
      Lane 3 : Mouse liver lysate
      Lane 4 : Mouse thymus lysate
      Lane 5 : Rat thymus lysate

      Secondary
      All lanes : Goat Anti-Rabbit IgG H&L (HRP) (ab97051) at 1/20000 dilution

      Predicted band size: 86 kDa

    • Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
      Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
      All lanes : Anti-SATB1 antibody [EPR3951] (ab109122) at 1/1000 dilution (Purified)

      Lane 1 : Jurkat (Human T cell leukemia T lymphocyte) nuclear extract lysate
      Lane 2 : Jurkat (Human T cell leukemia T lymphocyte) without nuclear extract lysate
      Lane 3 : Jurkat (Human T cell leukemia T lymphocyte) whole cell lysate

      Secondary
      All lanes : Goat Anti-Rabbit IgG H&L (HRP) (ab97051) at 1/20000 dilution

      Predicted band size: 86 kDa

    • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)
      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)

      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) analysis of human lung carcinoma tissue sections labeling SATB1 with Purified ab109122 at 1:500 dilution (0.246 µg/ml). Heat mediated antigen retrieval was performed using Heat mediated antigen retrieval using Bond™ Epitope Retrieval Solution 2 (pH 9.0) . Tissue was counterstained with Hematoxylin. Rabbit specific IHC polymer detection kit HRP/DAB (ab209101) secondary antibody was used at 1:0 dilution. PBS instead of the primary antibody was used as the negative control. 

    • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)
      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)

      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) analysis of mouse liver tissue sections labeling SATB1 with Purified ab109122 at 1:500 dilution (0.246 µg/ml). Heat mediated antigen retrieval was performed using Heat mediated antigen retrieval using Bond™ Epitope Retrieval Solution 2 (pH 9.0) . Tissue was counterstained with Hematoxylin. Rabbit specific IHC polymer detection kit HRP/DAB (ab209101) secondary antibody was used at 1:0 dilution. PBS instead of the primary antibody was used as the negative control. 

    • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)
      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-SATB1 antibody [EPR3951] (ab109122)

      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) analysis of rat liver tissue sections labeling SATB1 with Purified ab109122 at 1:500 dilution (0.246 µg/ml). Heat mediated antigen retrieval was performed using Heat mediated antigen retrieval using Bond™ Epitope Retrieval Solution 2 (pH 9.0) . Tissue was counterstained with Hematoxylin. Rabbit specific IHC polymer detection kit HRP/DAB (ab209101) secondary antibody was used at 1:0 dilution. PBS instead of the primary antibody was used as the negative control. 

    • Immunoprecipitation - Anti-SATB1 antibody [EPR3951] (ab109122)
      Immunoprecipitation - Anti-SATB1 antibody [EPR3951] (ab109122)

      Purified ab109122 at 1:20 dilution (0.6µg) immunoprecipitating SATB1 in Rat thymus lysate.
      Lane 1 (input): Rat thymus lysate 10 µg
      Lane 2 (+): ab109122 + Rat thymus lysate.
      Lane 3 (-): Rabbit monoclonal IgG (ab172730) instead of ab109122 in Rat thymus lysate.
      VeriBlot for IP Detection Reagent (HRP)(ab131366) (1:5000 dilution) was used for Western blotting.
      Blocking Buffer and concentration: 5% NFDM/TBST.
      Diluting buffer and concentration: 5% NFDM/TBST.
      Observed band size: kDa

    • Flow Cytometry - Anti-SATB1 antibody [EPR3951] (ab109122)
      Flow Cytometry - Anti-SATB1 antibody [EPR3951] (ab109122)

      Flow Cytometry analysis of Jurkat (Human T cell leukemia T lymphocyte) cells labelling SATB1 with Purified ab109122 at 1:20 dilution (10 µg/ml) (Red). Cells were fixed with 4% Paraformaldehyde and permeabilised with 90% Methanol. A Goat anti rabbit IgG (Alexa Fluor® 488, ab150077) secondary antibody was used at 1:2000. Isotype control - Rabbit monoclonal IgG (Black). Unlabelled control - Cell without incubation with primary antibody and secondary antibody (Blue).

    • Immunocytochemistry/ Immunofluorescence - Anti-SATB1 antibody [EPR3951] (ab109122)
      Immunocytochemistry/ Immunofluorescence - Anti-SATB1 antibody [EPR3951] (ab109122)

      Immunocytochemistry analysis of Jurkat (Human T cell leukemia T lymphocyte) cells labeling SATB1 with Purified ab109122 at 1:50 dilution (2.5 µg/ml). Cells were fixed in 4% Paraformaldehyde and permeabilized with 0.1% tritonX-100. Cells were counterstained with Ab195889 Anti-alpha Tubulin antibody [DM1A] - Microtubule Marker (Alexa Fluor® 594) 1:200 (2.5 µg/ml). Goat anti rabbit IgG (Alexa Fluor® 488, ab150077) was used as the secondary antibody at 1:1000 (2 µg/ml) dilution. DAPI (blue) was used as nuclear counterstain. PBS instead of the primary antibody was used as the secondary antibody only control.

    • Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)
      Western blot - Anti-SATB1 antibody [EPR3951] (ab109122)

      Lane 1: Wild-type HAP1 whole cell lysate (20 µg)
      Lane 2: SATB1 knockout HAP1 whole cell lysate (20 µg)
      Lane 3: Jurkat whole cell lysate (20 µg)
      Lane 4: THP1 whole cell lysate (20 µg)

      Lanes 1 - 4: Merged signal (red and green). Green - ab109122 observed at 100 kDa. Red - loading control, ab9484, observed at 37 kDa.

      ab109122 was shown to specifically react with SATB1 in wild-type HAP1 cells as signal was lost in SATB1 knockout cells. Wild-type and SATB1 knockout samples were subjected to SDS-PAGE. Ab109122 and ab9484 (Mouse anti-GAPDH loading control) were incubated overnight at 4°C at 1/1000 dilution and 1/20000 dilution respectively. Blots were developed with Goat anti-Rabbit IgG H&L (IRDye® 800CW) preabsorbed ab216773 and Goat anti-Mouse IgG H&L (IRDye® 680RD) preabsorbed ab216776 secondary antibodies at 1/20000 dilution for 1 hour at room temperature before imaging.

    • Anti-SATB1 antibody [EPR3951] (ab109122)
      Anti-SATB1 antibody [EPR3951] (ab109122)

    Protocols

    • Immunohistochemistry protocols
    • Immunocytochemistry & immunofluorescence protocols
    • Western blot protocols

    Click here to view the general protocols

    Datasheets and documents

    • SDS download

    • Datasheet download

      Download

    References (13)

    Publishing research using ab109122? Please let us know so that we can cite the reference in this datasheet.

    ab109122 has been referenced in 13 publications.

    • Wright CM  et al. scRNA-Seq Reveals New Enteric Nervous System Roles for GDNF, NRTN, and TBX3. Cell Mol Gastroenterol Hepatol 11:1548-1592.e1 (2021). PubMed: 33444816
    • Mao L  et al. Combination of oncolytic adenovirus targeting SATB1 and docetaxel for the treatment of castration-resistant prostate cancer. J Cancer 12:1846-1852 (2021). PubMed: 33613773
    • Yamagata M  et al. A cell atlas of the chick retina based on single-cell transcriptomics. Elife 10:N/A (2021). PubMed: 33393903
    • Li Z  et al. N6-methyladenine in DNA antagonizes SATB1 in early development. Nature 583:625-630 (2020). PubMed: 32669713
    • Zhong G  et al. H19 Knockdown Suppresses Proliferation and Induces Apoptosis by Regulating miR-130a-3p/SATB1 in Breast Cancer Cells. Onco Targets Ther 13:12501-12513 (2020). PubMed: 33324070
    View all Publications for this product

    Customer reviews and Q&As

    Show All Reviews Q&A
    Submit a review Submit a question

    1-2 of 2 Abreviews or Q&A

    ChIP abreview for Anti-SATB1 antibody [EPR3951]

    Inconclusive
    Abreviews
    Abreviews
    abreview image
    Application
    ChIP
    Sample
    Mouse Tissue lysate - nuclear (Thymus)
    Negative control
    upstream element of Gata6 all the procedures were done in wild type and in Satb1 knockout cells
    Specification
    Thymus
    Detection step
    Real-time PCR
    Type
    Cross-linking (X-ChIP)
    Duration of cross-linking step: 10 minute(s) and 0 second(s)
    Specification of the cross-linking agent: formaldehyde
    Positive control
    RHS6 region (previously worked in our laboratory)
    Read More
    The reviewer received a reward from Abcam’s Loyalty Program in thanks for submitting this Abreview and for helping the scientific community make better-informed decisions.

    Abcam user community

    Verified customer

    Submitted Jul 11 2016

    Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) abreview for Anti-SATB1 antibody [EPR3951]

    Excellent
    Abreviews
    Abreviews
    abreview image
    Application
    Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections)
    Sample
    Mouse Tissue sections (Skin)
    Antigen retrieval step
    Heat mediated
    Permeabilization
    No
    Specification
    Skin
    Blocking step
    Serum as blocking agent for 30 minute(s) · Concentration: 10% · Temperature: 22°C
    Fixative
    Paraformaldehyde
    Read More
    The reviewer received a reward from Abcam’s Loyalty Program in thanks for submitting this Abreview and for helping the scientific community make better-informed decisions.

    Ahmar Aziz

    Verified customer

    Submitted Dec 16 2015

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