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    rbbp4-antibody-epr3411-chip-grade-ab79416.pdf

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Epigenetics and Nuclear Signaling Chromatin Modifying Enzymes Acetylation
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RecombinantRabMAb

Recombinant Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)

  • Datasheet
Submit a review Q&A (2)References (13)

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ChIP-sequencing - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)
  • ChIP-sequencing - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)
  • Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Immunoprecipitation - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Flow Cytometry (Intracellular) - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)
  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Immunocytochemistry - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Immunocytochemistry - Anti-RBBP4 antibody [EPR3411] (ab79416)
  • Anti-RBBP4 antibody [EPR3411] (ab79416)

Key features and details

  • Produced recombinantly (animal-free) for high batch-to-batch consistency and long term security of supply
  • Rabbit monoclonal [EPR3411] to RBBP4 - ChIP Grade
  • Suitable for: Flow Cyt (Intra), WB, IP, IHC-P, ICC, ChIP-sequencing
  • Reacts with: Mouse, Rat, Human

Conjugates logo Related conjugates and formulations

Carrier Free PE

You may also be interested in

Primary
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Anti-RRN3 antibody (ab112052)
Protein
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Recombinant Human RBBP4 protein (ab130037)
Secondary
Product image
Goat Anti-Rabbit IgG H&L (Alexa Fluor® 488) (ab150077)

View more associated products

Overview

  • Product name

    Anti-RBBP4 antibody [EPR3411] - ChIP Grade
    See all RBBP4 primary antibodies
  • Description

    Rabbit monoclonal [EPR3411] to RBBP4 - ChIP Grade
  • Host species

    Rabbit
  • Tested applications

    Suitable for: Flow Cyt (Intra), WB, IP, IHC-P, ICC, ChIP-sequencingmore details
  • Species reactivity

    Reacts with: Mouse, Rat, Human
  • Immunogen

    Synthetic peptide within Human RBBP4 aa 1-100 (N terminal). The exact sequence is proprietary.
    Database link: Q09028

  • Positive control

    • WB: HeLa, Jurkat, NIH/3T3, 293 and HeLa, whole cell lysates. Mouse spleen, Rat spleen and Human fetal spleen tissue lysates; IHC-P: Human breast cancer, rat pancreas and Mouse cerebrum; Flow Cyt (intra): MCF7 cells; IP: HeLa cells; ICC: MCF-7 and HeLa cells. ChIP-Seq: Chromatin from HeLa cells.
  • General notes

    This product is a recombinant monoclonal antibody, which offers several advantages including:

    • - High batch-to-batch consistency and reproducibility
    • - Improved sensitivity and specificity
    • - Long-term security of supply
    • - Animal-free production
    For more information see here.

    Our RabMAb® technology is a patented hybridoma-based technology for making rabbit monoclonal antibodies. For details on our patents, please refer to RabMAb® patents.

    We are constantly working hard to ensure we provide our customers with best in class antibodies. As a result of this work we are pleased to now offer this antibody in purified format. We are in the process of updating our datasheets. The purified format is designated 'PUR' on our product labels. If you have any questions regarding this update, please contact our Scientific Support team.

Properties

  • Form

    Liquid
  • Storage instructions

    Shipped at 4°C. Store at +4°C short term (1-2 weeks). Upon delivery aliquot. Store at -20°C long term. Avoid freeze / thaw cycle.
  • Storage buffer

    pH: 7.20
    Preservative: 0.01% Sodium azide
    Constituents: 40% Glycerol (glycerin, glycerine), 59% PBS, 0.05% BSA
  • Concentration information loading...
  • Purity

    Protein A purified
  • Clonality

    Monoclonal
  • Clone number

    EPR3411
  • Isotype

    IgG
  • Research areas

    • Epigenetics and Nuclear Signaling
    • Chromatin Modifying Enzymes
    • Acetylation
    • Epigenetics and Nuclear Signaling
    • Chromatin Remodeling
    • ISWI/NURF/CHRAC
    • Epigenetics and Nuclear Signaling
    • Chromatin Remodeling
    • Polycomb Silencing
    • PRC2
    • Epigenetics and Nuclear Signaling
    • Cell cycle
    • Cell Cycle Inhibitors
    • Rb
    • Epigenetics and Nuclear Signaling
    • Chromatin Modifying Enzymes
    • Acetylation
    • HDACs
    • Class I
    • Cancer
    • Oncoproteins/suppressors
    • Tumor suppressors
    • Rb family
    • Epigenetics and Nuclear Signaling
    • ChIP assays
    • ChIP antibodies

Associated products

  • Alternative Versions

    • PE Anti-RBBP4 antibody [EPR3411] (ab210834)
    • Anti-RBBP4 antibody [EPR3411] - ChIP Grade – BSA and Azide free (ab236047)
  • Compatible Secondaries

    • Goat Anti-Rabbit IgG H&L (HRP) (ab97051)
  • Isotype control

    • Rabbit IgG, monoclonal [EPR25A] - Isotype Control (ab172730)
  • Positive Controls

    • HeLa nuclear extract lysate (ab14655)
    • NIH/3T3 nuclear extract lysate (ab14874)
  • Recombinant Protein

    • Recombinant Human RBBP4 protein (ab130037)

Applications

The Abpromise guarantee

Our Abpromise guarantee covers the use of ab79416 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Application Abreviews Notes
Flow Cyt (Intra)
1/20.

ab172730 - Rabbit monoclonal IgG, is suitable for use as an isotype control with this antibody.  For unpurified use at 1/50

WB
1/10000 - 1/50000. Detects a band of approximately 48 kDa (predicted molecular weight: 48 kDa).
IP
1/20.

For unpurified use at 1/50

IHC-P
1/8000. Perform heat mediated antigen retrieval before commencing with IHC staining protocol.

See IHC antigen retrieval protocols.

For unpurified use at 1/100 - 1/250

ICC
1/100 - 1/250.
ChIP-sequencing
Use 3 µg for 30 µg of chromatin.
Notes
Flow Cyt (Intra)
1/20.

ab172730 - Rabbit monoclonal IgG, is suitable for use as an isotype control with this antibody.  For unpurified use at 1/50

WB
1/10000 - 1/50000. Detects a band of approximately 48 kDa (predicted molecular weight: 48 kDa).
IP
1/20.

For unpurified use at 1/50

IHC-P
1/8000. Perform heat mediated antigen retrieval before commencing with IHC staining protocol.

See IHC antigen retrieval protocols.

For unpurified use at 1/100 - 1/250

ICC
1/100 - 1/250.
ChIP-sequencing
Use 3 µg for 30 µg of chromatin.

Target

  • Function

    Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex.
  • Sequence similarities

    Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
    Contains 6 WD repeats.
  • Cellular localization

    Nucleus.
  • Target information above from: UniProt accession Q09028 The UniProt Consortium
    The Universal Protein Resource (UniProt) in 2010
    Nucleic Acids Res. 38:D142-D148 (2010) .

    Information by UniProt
  • Database links

    • Entrez Gene: 5928 Human
    • Entrez Gene: 19646 Mouse
    • Entrez Gene: 313048 Rat
    • Omim: 602923 Human
    • SwissProt: Q09028 Human
    • SwissProt: Q60972 Mouse
    • Unigene: 16003 Human
    • Unigene: 12145 Mouse
    • Alternative names

      • CAF I p48 antibody
      • CAF-1 subunit C antibody
      • CAF-I 48 kDa subunit antibody
      • CAF-I p48 antibody
      • Chromatin assembly factor 1 subunit C antibody
      • Chromatin assembly factor I p48 subunit antibody
      • Chromatin assembly factor/CAF 1 p48 subunit antibody
      • Histone-binding protein RBBP4 antibody
      • MSI1 protein homolog antibody
      • Nucleosome-remodeling factor subunit RBAP48 antibody
      • NURF55 antibody
      • RB binding protein 4 chromatin remodeling factor antibody
      • RbAp 48 antibody
      • RBAP48 antibody
      • RBBP-4 antibody
      • RBBP4 antibody
      • RBBP4_HUMAN antibody
      • Retinoblastoma binding protein 4 antibody
      • Retinoblastoma binding protein p48 antibody
      • Retinoblastoma-binding protein 4 antibody
      • Retinoblastoma-binding protein p48 antibody
      see all

    Images

    • ChIP-sequencing - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)
      ChIP-sequencing - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)

      Chromatin was prepared from HeLa cells. Cells were fixed with 1% formaldehyde for 10 minutes. ChIP was performed with 10^7 HeLa cells and 8 µg of ab79416 [EPR3411]. ChIP DNA was sequenced on the Illumina NovaSeq 6000 to a depth of 30 million reads.

      Additional screenshots of mapped reads can be downloaded here.

    • ChIP-sequencing - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)
      ChIP-sequencing - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)

      Chromatin was prepared from HeLa cells. Cells were fixed with 1% formaldehyde for 10 minutes. ChIP was performed with 30 µg of chromatin and 3 µg of ab79416. ChIP DNA was sequenced on the Illumina NextSeq 500 to a depth of 30 million reads. ChIP-Seq validation performed by Active Motif, Carlsbad, CA.

      Additional screenshots of mapped reads can be downloaded here.

      DOI: 10.7554/eLife.54993.

    • Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
      All lanes : Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416) at 0.006 µg/ml (purified)

      Lane 1 : HeLa (Human cervix adenocarcinoma epithelial cell) whole cell lysates
      Lane 2 : Mouse spleen lysates
      Lane 3 : Rat spleen lysates

      Lysates/proteins at 15 µg per lane.

      Secondary
      All lanes : Goat Anti-Rabbit IgG H&L (HRP) (ab97051) at 1/20000 dilution

      Predicted band size: 48 kDa



      Blocking and diluting buffer: 5% NFDM/TBST. 

    • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)

      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) analysis of Rat pancreas tissue sections labeling RBBP4 with Purified ab79416 at 1:8000 dilution (0.014 µg/ml). Heat mediated antigen retrieval was performed using ab93684 (Tris/EDTA buffer, pH 9.0) ImmunoHistoProbe one step HRP Polymer (ready to use) was used as the secondary antibody. Negative control:PBS instead of the primary antibody.Hematoxylinwas used as a counterstain

    • Immunoprecipitation - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Immunoprecipitation - Anti-RBBP4 antibody [EPR3411] (ab79416)

      ab79416 (purified) at 1:20 dilution (2µg) immunoprecipitating RBBP4 in HeLa whole cell lysate.
      Lane 1 (input): HeLa (Human cervix adenocarcinoma epithelial cell) whole cell lysate 10µg
      Lane 2 (+): ab79416 & HeLa whole cell lysate
      Lane 3 (-): Rabbit monoclonal IgG (ab172730) instead of ab79416 in HeLa whole cell lysate
      For western blotting, VeriBlot for IP Detection Reagent (HRP) (ab131366) was used for detection at 1:1000 dilution.
      Blocking and diluting buffer: 5% NFDM/TBST.

    • Flow Cytometry (Intracellular) - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)
      Flow Cytometry (Intracellular) - Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416)

      Intracellular Flow Cytometry analysis of MCF7 (Human breast adenocarcinoma epithelial cell) cells labeling RBBP4 with purified ab79416 at 1/20 dilution (10µg/ml) (red). Cells were fixed with 4% Paraformaldehyde. A Goat anti rabbit IgG (Alexa Fluor® 488) secondary antibody was used at 1/2000 dilution. Isotype control - Rabbit monoclonal IgG (Black). Unlabeled control - Cell without incubation with primary antibody and secondary antibody (Blue). 

       

       

    • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)

      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) analysis of Mouse cerebrum tissue sections labeling RBBP4 with Purified ab79416 at 1:8000 dilution (0.014 µg/ml). Heat mediated antigen retrieval was performed using ab93684 (Tris/EDTA buffer, pH 9.0) ImmunoHistoProbe one step HRP Polymer (ready to use) was used as the secondary antibody. Negative control:PBS instead of the primary antibody.Hematoxylinwas used as a counterstain

    • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)

      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) analysis of Human breast cancer tissue sections labeling RBBP4 with Purified ab79416 at 1:8000 dilution (0.014 µg/ml). Heat mediated antigen retrieval was performed using ab93684 (Tris/EDTA buffer, pH 9.0) ImmunoHistoProbe one step HRP Polymer (ready to use)was used as the secondary antibody. Negative control:PBS instead of the primary antibody. Hematoxylinwas used as a counterstain

    • Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416) at 0.006 µg/ml (purified) + Human fetal spleen lysates at 15 µg

      Secondary
      Goat Anti-Rabbit IgG (HRP) with minimal cross-reactivity with human IgG at 1/2000 dilution

      Predicted band size: 48 kDa



      Blocking and diluting buffer: 5% NFDM/TBST. 

    • Immunocytochemistry - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Immunocytochemistry - Anti-RBBP4 antibody [EPR3411] (ab79416)

      ab79416 staining RBBP4 in MCF-7 (human breast carcinoma) cells by ICC (Immunocytochemistry). Cells were fixed with 4% Paraformaldehyde and permeabilized with 0.1% tritonX-100. Samples were incubated with primary antibody at a dilution of 1/500. A goat anti rabbit IgG (Alexa Fluor® 488) (ab150077) was used as the secondary antibody at a dilution of 1/1000. DAPI was used as a nuclear counterstain.

      Negative control 1: PBS only.

    • Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Western blot - Anti-RBBP4 antibody [EPR3411] (ab79416)
      All lanes : Anti-RBBP4 antibody [EPR3411] - ChIP Grade (ab79416) at 1/50000 dilution (Unpurifed)

      Lane 1 : HeLa lysate
      Lane 2 : Jurkat lysate
      Lane 3 : NIIH/3T3 lysate
      Lane 4 : 293 lysate

      Lysates/proteins at 10 µg per lane.

      Secondary
      All lanes : HRP labelled goat anti-rabbit at 1/2000 dilution

      Predicted band size: 48 kDa
      Observed band size: 48 kDa

    • Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Immunohistochemistry (Formalin/PFA-fixed paraffin-embedded sections) - Anti-RBBP4 antibody [EPR3411] (ab79416)

      Unpurifed ab79416, at 1/100 dilution, staining RBBP4 in human breast carcinoma tissue by Immunohistochemistry.

      Heat mediated antigen retrieval was performed before commencing with IHC staining protocol.

    • Immunocytochemistry - Anti-RBBP4 antibody [EPR3411] (ab79416)
      Immunocytochemistry - Anti-RBBP4 antibody [EPR3411] (ab79416)

      Immunocytochemical staining of RBBP4 in HeLa cells using unpurified ab79416 at 1/100 dilution.

    • Anti-RBBP4 antibody [EPR3411] (ab79416)
      Anti-RBBP4 antibody [EPR3411] (ab79416)

    Protocols

    • Flow cytometry protocols
    • Immunoprecipitation protocols
    • Immunohistochemistry protocols
    • Immunocytochemistry & immunofluorescence protocols
    • Western blot protocols

    Click here to view the general protocols

    Datasheets and documents

    • Datasheet download

      Download

    References (13)

    Publishing research using ab79416? Please let us know so that we can cite the reference in this datasheet.

    ab79416 has been referenced in 13 publications.

    • Miao X  et al. Loss of RBBP4 results in defective inner cell mass, severe apoptosis, hyperacetylated histones and preimplantation lethality in mice†. Biol Reprod 103:13-23 (2020). PubMed: 32285100
    • Gomes AP  et al. Dynamic Incorporation of Histone H3 Variants into Chromatin Is Essential for Acquisition of Aggressive Traits and Metastatic Colonization. Cancer Cell 36:402-417.e13 (2019). PubMed: 31564638
    • Smith HW  et al. An ErbB2/c-Src axis links bioenergetics with PRC2 translation to drive epigenetic reprogramming and mammary tumorigenesis. Nat Commun 10:2901 (2019). PubMed: 31263101
    • Patel D  et al. The histone demethylase LSD1 regulates inner ear progenitor differentiation through interactions with Pax2 and the NuRD repressor complex. PLoS One 13:e0191689 (2018). PubMed: 29370269
    • Kraushaar DC  et al. The gene repressor complex NuRD interacts with the histone variant H3.3 at promoters of active genes. Genome Res 28:1646-1655 (2018). PubMed: 30254051
    View all Publications for this product

    Customer reviews and Q&As

    Show All Reviews Q&A
    Submit a review Submit a question

    1-2 of 2 Abreviews or Q&A

    Question

    Our customer is looking for an antibody that will be specific for RbAp48 only. so,

    I found ab79416 but this iswritten on the data sheet as below.

    Sequence similarities :

    Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.

    Contains 7 WD repeats.

    So I would like to know if there is cross reactivity with RbAp46 protein.

    Please let me know.

    Read More

    Abcam community

    Verified customer

    Asked on May 08 2012

    Answer

    Thank you very much for your inquiry. As x is out of the office this week, I have follow up in regards to your question with the laboratory.

    The laboratory has confirmed that the immunogen shares only 64% identity with RbAp46 protein, sowe would not predict cross-reactivity. We expect this antibodytherefore to bespecific for RbAp48, however we have not tested this experimentally.

    The information you are referring to on the datasheet, means that the antibody belongs to that family of proteins. The protein RbAp48 is however a distinct protein, sharing some homology with the family members. Please see also the SwissProt entry of RbAp48 for additional information: http://www.uniprot.org/uniprot/Q09028

    I hope this information is helpful . Please do not hesitate to get back to us, should you or the customer have anyquestions or concerns.

    Read More

    Abcam Scientific Support

    Answered on May 08 2012

    Question

    Our customer is going to purchase antibodies which detect RbAp46 and RbAp48 respectively.
    She is going to test WB, IP and IHC-P with mouse sample.
    I searched ab79416 and ab109285 and let me know those are suitable.

    Read More

    Abcam community

    Verified customer

    Asked on May 04 2012

    Answer


    The choice is perfect. Both ab79416 and ab109285are guaranteed to work in WB, IP, IHC-P and in Mouse.

    Read More

    Abcam Scientific Support

    Answered on May 04 2012

    Please note: All products are "FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES"
    For licensing inquiries, please contact partnerships@abcam.com

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